Parental gene:

SUMO1, ENSLAFG00000022855

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_3:24417928..24436262(+)


>ENSLAFG00000022855
CTTTTCTTTCAGGAGGCAAAACCTTCAACTGAGGACTTGGGAGATAAGAAAGAAGGAGAATACATCAAACTCAAAGTCAT
TGGACAGGATAGCAGTGAAATTCACTTCAAGGTGAAAATGACGACACATCTCAAGAAACTCAAAGAATCATACTGTCAAA
GACAGGGAGTTCCAATGAATTCACTCAGGTTTCTCTTTGAAGGTCAGAGAATTGCTGATAATCACACTCCAAAAGAACTG
GGTATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCATTCAGCAGTTTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013225 possible_ortholog 5 retrogenes
retro_amel_1068, retro_amel_233, retro_amel_236, retro_amel_315, retro_amel_49,
Bos taurus ENSBTAG00000009859 ortholog_one2many 6 retrogenes
retro_btau_112, retro_btau_1512, retro_btau_1705, retro_btau_357, retro_btau_363, retro_btau_499,
Canis familiaris ENSCAFG00000012431 ortholog_one2many 8 retrogenes
retro_cfam_1226, retro_cfam_1253, retro_cfam_139, retro_cfam_1815, retro_cfam_1912, retro_cfam_2048, retro_cfam_386, retro_cfam_985,
Choloepus hoffmanni ENSCHOG00000009739 possible_ortholog 2 retrogenes
retro_chof_190, retro_chof_2068,
Dasypus novemcinctus ENSDNOG00000015868 possible_ortholog 10 retrogenes
retro_dnov_1070, retro_dnov_1324, retro_dnov_1610, retro_dnov_1623, retro_dnov_1826, retro_dnov_1876, retro_dnov_2068, retro_dnov_2330, retro_dnov_2423, retro_dnov_997,
Felis catus ENSFCAG00000031005 ortholog_one2one 6 retrogenes
retro_fcat_1520, retro_fcat_218, retro_fcat_26, retro_fcat_472, retro_fcat_6, retro_fcat_862,
Loxodonta africana ENSLAFG00000025811 within_species_paralog 10 retrogenes
retro_lafr_104, retro_lafr_1222, retro_lafr_1240, retro_lafr_200, retro_lafr_254, retro_lafr_324, retro_lafr_36, retro_lafr_488, retro_lafr_858, retro_lafr_888,
Microcebus murinus ENSMICG00000008968 ortholog_one2one 5 retrogenes
retro_mmur_1177, retro_mmur_1300, retro_mmur_1493, retro_mmur_1554, retro_mmur_1602,
Myotis lucifugus ENSMLUG00000007504 ortholog_one2one 2 retrogenes
retro_mluc_1346, retro_mluc_188,
Macaca mulatta ENSMMUG00000005240 ortholog_one2one 7 retrogenes
retro_mmul_1108, retro_mmul_2035, retro_mmul_2081, retro_mmul_313, retro_mmul_373, retro_mmul_450, retro_mmul_855,
Nomascus leucogenys ENSNLEG00000006997 possible_ortholog 4 retrogenes
retro_nleu_277, retro_nleu_384, retro_nleu_855, retro_nleu_865,
Otolemur garnettii ENSOGAG00000030345 ortholog_one2one 1 retrogene
retro_ogar_215,
Procavia capensis ENSPCAG00000006870 ortholog_one2one 1 retrogene
retro_pcap_136,
Pongo abelii ENSPPYG00000013083 possible_ortholog 3 retrogenes
retro_pabe_11, retro_pabe_1830, retro_pabe_775,
Pan troglodytes ENSPTRG00000012817 possible_ortholog 1 retrogene
retro_ptro_119,
Sarcophilus harrisii ENSSHAG00000011968 ortholog_one2many 1 retrogene
retro_shar_375,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_111 71.74 91.09
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2. retro_lafr_189 81.33 72.28
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3. retro_lafr_540 55.21 90.10
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4. retro_lafr_951 84.69 95.05
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5. retro_lafr_1148 70.21 92.08
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Download FASTA sequences of all ENSLAFG00000022855 retrocopies