Parental gene: | SUMO1, ENSMMUG00000005240 |
| Aliases: | None |
| Description: | small ubiquitin-related modifier 1 [Source:RefSeq peptide;Acc:NP_001182571] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 12:66025093..66038369(-) |
>ENSMMUG00000005240
ATTTTCTTTCAGGAGGCAAAACCTTCAACTGAGGACTTGGGGGATAAGAAGGAAGGTGAATATATTAAACTCAAAGTCAT
TGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAA
GACAGGGCGTTCCAATGAATTCACTCAGGTTTCTCTTTGAGGGTCAGAGAATTGCTGATAATCATACTCCAAAAGAACTG
GGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCATTCAACAGTTTAG
ATTTTCTTTCAGGAGGCAAAACCTTCAACTGAGGACTTGGGGGATAAGAAGGAAGGTGAATATATTAAACTCAAAGTCAT
TGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACTCAAAGAATCATACTGTCAAA
GACAGGGCGTTCCAATGAATTCACTCAGGTTTCTCTTTGAGGGTCAGAGAATTGCTGATAATCATACTCCAAAAGAACTG
GGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAAACGGGGGGTCATTCAACAGTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 19 .99 RPM |
| SRP007412_brain | 4 .03 RPM |
| SRP007412_cerebellum | 3 .04 RPM |
| SRP007412_heart | 1 .59 RPM |
| SRP007412_kidney | 4 .23 RPM |
| SRP007412_liver | 0 .75 RPM |
| SRP007412_testis | 1 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009859 | ortholog_one2many | 6 retrogenes | |
| Canis familiaris | ENSCAFG00000012431 | ortholog_one2many | 8 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000009739 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000031005 | ortholog_one2one | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000022855 | ortholog_one2one | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000008968 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007504 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000006760 | within_species_paralog | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006997 | possible_ortholog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030345 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000006870 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013083 | possible_ortholog | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000012817 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011968 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_313 | 90.82 | 97.03 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_373 | 96.94 | 97.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_450 | 81.63 | 97.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_855 | 97.96 | 97.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmul_1108 | 60.00 | 94.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmul_2035 | 83.70 | 91.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmul_2081 | 95.96 | 97.03 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000005240 retrocopies