Parental gene:

SUMO1, ENSCHOG00000009739

Aliases:None
Description:small ubiquitin-like modifier 1 [Source:HGNC Symbol;Acc:12502]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_6915:48815..70663(-)


>ENSCHOG00000009739
CGGAAGTTCCTCCCGCGGTGTTGTTCTGTAGGGAAGAGAGACGGATTTATAAACCCCGCAAGGTTCTGCTTGCCCGAGGT
CGCTGCTGTGCGGAGACCCCGAGGTGAAGCCACTGTCACCATGTCTGACCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAGCAGTGAGATTCACTTCAAGGTGAAAATG
ACAACACATCTCAAGAAACTCAAGGAATCATACTGTCAGAGACAGGGAGTTCCAATGAATTCACTCAGGTTTCTCTTTGA
AGGTCAGAGAATTGCTGATAATCACACTCCAAAAGAACTGGGTATGGAGGAAGAAGATGTGATTGAAGTATATCAGGAAC
AAACAGGGGGTCATTCAACGGTTTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013225 possible_ortholog 5 retrogenes
retro_amel_1068, retro_amel_233, retro_amel_236, retro_amel_315, retro_amel_49,
Bos taurus ENSBTAG00000009859 possible_ortholog 6 retrogenes
retro_btau_112, retro_btau_1512, retro_btau_1705, retro_btau_357, retro_btau_363, retro_btau_499,
Canis familiaris ENSCAFG00000012431 possible_ortholog 8 retrogenes
retro_cfam_1226, retro_cfam_1253, retro_cfam_139, retro_cfam_1815, retro_cfam_1912, retro_cfam_2048, retro_cfam_386, retro_cfam_985,
Choloepus hoffmanni ENSCHOG00000010239 within_species_paralog 1 retrogene
retro_chof_2468,
Felis catus ENSFCAG00000031005 possible_ortholog 6 retrogenes
retro_fcat_1520, retro_fcat_218, retro_fcat_26, retro_fcat_472, retro_fcat_6, retro_fcat_862,
Loxodonta africana ENSLAFG00000022855 possible_ortholog 5 retrogenes
retro_lafr_111, retro_lafr_1148, retro_lafr_189, retro_lafr_540, retro_lafr_951,
Myotis lucifugus ENSMLUG00000007504 possible_ortholog 2 retrogenes
retro_mluc_1346, retro_mluc_188,
Macaca mulatta ENSMMUG00000005240 possible_ortholog 7 retrogenes
retro_mmul_1108, retro_mmul_2035, retro_mmul_2081, retro_mmul_313, retro_mmul_373, retro_mmul_450, retro_mmul_855,
Mustela putorius furo ENSMPUG00000000335 possible_ortholog 2 retrogenes
retro_mputfur_257, retro_mputfur_33,
Mus musculus ENSMUSG00000026021 possible_ortholog 5 retrogenes
retro_mmus_1594, retro_mmus_2129, retro_mmus_2135, retro_mmus_252, retro_mmus_2962,
Nomascus leucogenys ENSNLEG00000006997 ortholog_one2one 4 retrogenes
retro_nleu_277, retro_nleu_384, retro_nleu_855, retro_nleu_865,
Otolemur garnettii ENSOGAG00000030345 possible_ortholog 1 retrogene
retro_ogar_215,
Pongo abelii ENSPPYG00000013083 possible_ortholog 3 retrogenes
retro_pabe_11, retro_pabe_1830, retro_pabe_775,
Pan troglodytes ENSPTRG00000012817 possible_ortholog 1 retrogene
retro_ptro_119,
Sarcophilus harrisii ENSSHAG00000011968 ortholog_one2one 1 retrogene
retro_shar_375,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_190 90.54 51.06
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2. retro_chof_2068 68.49 51.06
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Download FASTA sequences of all ENSCHOG00000009739 retrocopies