Parental gene:

RPS15A, ENSTSYG00000007627

Aliases:None
Description:ribosomal protein S15a [Source:HGNC Symbol;Acc:10389]
Organism:Tarsier (Tarsius syrichta)
Coordinates:GeneScaffold_3585:14315..20531(-)


>ENSTSYG00000007627
GTGCGCATGAATGTTCTGGCTGATGCTCTGAAGAGCATCAACAATGCCGAAAAGAGAGGCAAACGCCAGGTTCTTATCAG
GCCGTGCTCCAAAGTCATTGTCCGGTTTCTAACTGTGATGATGAAGCATGGTTACATTGGCGAATTTGAAATCATTGATG
ATCACAGAGCTGGAAAAATTGTTGTGAACCTCACAGGCAGGTTAAACAAGTGTGGCGTGATCAGCCCCAGATTTGATGTG
CAACTTAAAGATCTAGAAAAGTGGCAGAATAATCTGCTTCCATCCCGCCAGTTTGGTTTCATTGTACTGACAACCTCAGC
TGGCATCATGGACCACGAAGAAGCAAGAAGGAAACACACAGGAGGGAAAATCCTGGGATTCTTTTTCTAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020733 possible_ortholog 5 retrogenes
retro_btau_14, retro_btau_171, retro_btau_3, retro_btau_57, retro_btau_98,
Callithrix jacchus ENSCJAG00000020071 possible_ortholog 6 retrogenes
retro_cjac_120, retro_cjac_128, retro_cjac_170, retro_cjac_231, retro_cjac_359, retro_cjac_80,
Felis catus ENSFCAG00000010625 ortholog_one2one 11 retrogenes
retro_fcat_125, retro_fcat_1712, retro_fcat_1745, retro_fcat_1951, retro_fcat_1966, retro_fcat_34, retro_fcat_37, retro_fcat_655, retro_fcat_665, retro_fcat_879, retro_fcat_9,
Gadus morhua ENSGMOG00000005862 ortholog_one2many 1 retrogene
retro_gmor_16,
Latimeria chalumnae ENSLACG00000011476 ortholog_one2one 1 retrogene
retro_lcha_55,
Loxodonta africana ENSLAFG00000026996 ortholog_one2one 13 retrogenes
retro_lafr_1161, retro_lafr_1201, retro_lafr_210, retro_lafr_236, retro_lafr_247, retro_lafr_309, retro_lafr_323, retro_lafr_356, retro_lafr_571, retro_lafr_613, retro_lafr_629, retro_lafr_759, retro_lafr_956,
Mustela putorius furo ENSMPUG00000013424 ortholog_one2one 12 retrogenes
retro_mputfur_1022, retro_mputfur_1124, retro_mputfur_1165, retro_mputfur_1296, retro_mputfur_1404, retro_mputfur_1417, retro_mputfur_1505, retro_mputfur_43, retro_mputfur_448, retro_mputfur_589, retro_mputfur_591, retro_mputfur_772,
Mus musculus ENSMUSG00000008683 ortholog_one2one 29 retrogenes
retro_mmus_1133, retro_mmus_1337, retro_mmus_1863, retro_mmus_2022, retro_mmus_2086, retro_mmus_2108, retro_mmus_2428, retro_mmus_2461, retro_mmus_2515, retro_mmus_2580, retro_mmus_2608, retro_mmus_2609, retro_mmus_2680, retro_mmus_2779, retro_mmus_2842, retro_mmus_3161, retro_mmus_3293, retro_mmus_3304, retro_mmus_3348, retro_mmus_3352, retro_mmus_3442, retro_mmus_3482, retro_mmus_357, retro_mmus_408, retro_mmus_670, retro_mmus_757, retro_mmus_768, retro_mmus_816, retro_mmus_928,
Otolemur garnettii ENSOGAG00000013199 possible_ortholog 14 retrogenes
retro_ogar_102, retro_ogar_1254, retro_ogar_1302, retro_ogar_1361, retro_ogar_1636, retro_ogar_2241, retro_ogar_2361, retro_ogar_269, retro_ogar_2775, retro_ogar_3283, retro_ogar_3367, retro_ogar_563, retro_ogar_712, retro_ogar_87,
Procavia capensis ENSPCAG00000002934 ortholog_one2one 5 retrogenes
retro_pcap_113, retro_pcap_142, retro_pcap_304, retro_pcap_362, retro_pcap_41,
Pan troglodytes ENSPTRG00000007823 possible_ortholog 2 retrogenes
retro_ptro_289, retro_ptro_76,
Sarcophilus harrisii ENSSHAG00000017293 ortholog_one2one 6 retrogenes
retro_shar_311, retro_shar_555, retro_shar_619, retro_shar_720, retro_shar_736, retro_shar_764,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_68 79.23 100.00
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2. retro_tsyr_72 65.12 98.45
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3. retro_tsyr_79 84.80 96.12
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4. retro_tsyr_124 80.00 68.22
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5. retro_tsyr_128 75.59 97.67
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6. retro_tsyr_152 84.68 86.05
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7. retro_tsyr_184 71.15 79.07
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8. retro_tsyr_258 78.12 96.90
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9. retro_tsyr_271 88.37 100.00
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10. retro_tsyr_274 82.00 75.19
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11. retro_tsyr_275 85.83 98.45
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12. retro_tsyr_284 87.60 98.45
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13. retro_tsyr_289 84.73 100.00
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14. retro_tsyr_292 67.57 56.59
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15. retro_tsyr_332 88.60 87.60
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16. retro_tsyr_420 98.41 97.67
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17. retro_tsyr_422 81.45 95.35
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18. retro_tsyr_449 61.34 92.25
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19. retro_tsyr_538 86.05 100.00
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20. retro_tsyr_588 80.00 68.99
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21. retro_tsyr_595 72.31 100.00
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22. retro_tsyr_630 93.55 96.12
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23. retro_tsyr_631 92.25 100.00
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24. retro_tsyr_687 82.89 58.91
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25. retro_tsyr_1017 87.69 100.00
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26. retro_tsyr_1024 76.83 62.79
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27. retro_tsyr_1049 81.51 90.70
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28. retro_tsyr_1051 82.42 70.54
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29. retro_tsyr_1151 78.12 99.22
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30. retro_tsyr_1240 77.69 100.00
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31. retro_tsyr_1336 76.15 99.22
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32. retro_tsyr_1449 96.85 97.67
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33. retro_tsyr_1500 93.08 100.00
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34. retro_tsyr_1517 68.42 87.60
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35. retro_tsyr_1562 93.10 67.44
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36. retro_tsyr_1628 82.42 70.54
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37. retro_tsyr_1669 81.18 65.89
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38. retro_tsyr_1808 85.39 68.99
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39. retro_tsyr_1814 79.52 63.57
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40. retro_tsyr_1928 79.12 70.54
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41. retro_tsyr_1959 97.67 100.00
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42. retro_tsyr_2041 91.20 96.12
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43. retro_tsyr_2137 53.39 90.70
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44. retro_tsyr_2145 93.80 100.00
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45. retro_tsyr_2164 84.62 100.00
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Download FASTA sequences of all ENSTSYG00000007627 retrocopies