Parental gene:

Rps15a, ENSMUSG00000008683

Aliases:Rps15a, A630031B11Rik
Description:ribosomal protein S15A [Source:MGI Symbol;Acc:MGI:2389091]
Organism:Mouse (Mus musculus)
Coordinates:7:118104377..118116186(-)


>ENSMUSG00000008683
ATGGTGCGAATGAATGTTCTGGCGGATGCTCTCAAGAGCATCAACAACGCTGAGAAGAGAGGCAAACGCCAGGTCCTCAT
CAGGCCATGTTCTAAAGTCATCGTTCGGTTCTTAACCGTGATGATGAAGCACGGATACATTGGTGAATTTGAGATCATTG
ATGATCACAGAGCTGGGAAGATTGTTGTGAACCTCACAGGAAGGTTGAACAAGTGTGGCGTTATAAGCCCTAGATTTGAT
GTTCAACTCAAAGACCTAGAGAAATGGCAGAACAACCTGCTCCCTTCACGTCAGTTTGGCTTCATTGTGCTGACAACCTC
GGCTGGCATTATGGACCATGAAGAGGCAAGACGAAAACATACAGGAGGGAAAATCCTGGGATTCTTTTTTTAA

Library Parental gene expression (RPM)
SRP007412_brain 97 .00 RPM
SRP007412_cerebellum 80 .50 RPM
SRP007412_heart 56 .78 RPM
SRP007412_kidney 53 .23 RPM
SRP007412_liver 40 .94 RPM
SRP007412_testis 60 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020733 possible_ortholog 5 retrogenes
retro_btau_14, retro_btau_171, retro_btau_3, retro_btau_57, retro_btau_98,
Callithrix jacchus ENSCJAG00000020071 possible_ortholog 6 retrogenes
retro_cjac_120, retro_cjac_128, retro_cjac_170, retro_cjac_231, retro_cjac_359, retro_cjac_80,
Felis catus ENSFCAG00000010625 ortholog_one2one 11 retrogenes
retro_fcat_125, retro_fcat_1712, retro_fcat_1745, retro_fcat_1951, retro_fcat_1966, retro_fcat_34, retro_fcat_37, retro_fcat_655, retro_fcat_665, retro_fcat_879, retro_fcat_9,
Gadus morhua ENSGMOG00000005862 ortholog_one2many 1 retrogene
retro_gmor_16,
Latimeria chalumnae ENSLACG00000011476 ortholog_one2one 1 retrogene
retro_lcha_55,
Loxodonta africana ENSLAFG00000026996 ortholog_one2one 13 retrogenes
retro_lafr_1161, retro_lafr_1201, retro_lafr_210, retro_lafr_236, retro_lafr_247, retro_lafr_309, retro_lafr_323, retro_lafr_356, retro_lafr_571, retro_lafr_613, retro_lafr_629, retro_lafr_759, retro_lafr_956,
Mustela putorius furo ENSMPUG00000013424 ortholog_one2one 12 retrogenes
retro_mputfur_1022, retro_mputfur_1124, retro_mputfur_1165, retro_mputfur_1296, retro_mputfur_1404, retro_mputfur_1417, retro_mputfur_1505, retro_mputfur_43, retro_mputfur_448, retro_mputfur_589, retro_mputfur_591, retro_mputfur_772,
Otolemur garnettii ENSOGAG00000013199 possible_ortholog 14 retrogenes
retro_ogar_102, retro_ogar_1254, retro_ogar_1302, retro_ogar_1361, retro_ogar_1636, retro_ogar_2241, retro_ogar_2361, retro_ogar_269, retro_ogar_2775, retro_ogar_3283, retro_ogar_3367, retro_ogar_563, retro_ogar_712, retro_ogar_87,
Procavia capensis ENSPCAG00000002934 ortholog_one2one 5 retrogenes
retro_pcap_113, retro_pcap_142, retro_pcap_304, retro_pcap_362, retro_pcap_41,
Pan troglodytes ENSPTRG00000007823 possible_ortholog 2 retrogenes
retro_ptro_289, retro_ptro_76,
Sarcophilus harrisii ENSSHAG00000017293 ortholog_one2one 6 retrogenes
retro_shar_311, retro_shar_555, retro_shar_619, retro_shar_720, retro_shar_736, retro_shar_764,
Tarsius syrichta ENSTSYG00000007627 ortholog_one2one 45 retrogenes
retro_tsyr_1017, retro_tsyr_1024, retro_tsyr_1049, retro_tsyr_1051, retro_tsyr_1151, retro_tsyr_124, retro_tsyr_1240, retro_tsyr_128, retro_tsyr_1336, retro_tsyr_1449, retro_tsyr_1500, retro_tsyr_1517, retro_tsyr_152, retro_tsyr_1562, retro_tsyr_1628, retro_tsyr_1669, retro_tsyr_1808, retro_tsyr_1814, retro_tsyr_184, retro_tsyr_1928, retro_tsyr_1959, retro_tsyr_2041, retro_tsyr_2137, retro_tsyr_2145, retro_tsyr_2164, retro_tsyr_258, retro_tsyr_271, retro_tsyr_274, retro_tsyr_275, retro_tsyr_284, retro_tsyr_289, retro_tsyr_292, retro_tsyr_332, retro_tsyr_420, retro_tsyr_422, retro_tsyr_449, retro_tsyr_538, retro_tsyr_588, retro_tsyr_595, retro_tsyr_630, retro_tsyr_631, retro_tsyr_68, retro_tsyr_687, retro_tsyr_72, retro_tsyr_79,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_357 74.24 99.23
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmus_408 90.08 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmus_670 93.08 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mmus_757 97.69 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_mmus_768 50.60 62.31
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_mmus_816 65.57 90.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_mmus_928 78.29 99.23
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_mmus_1133 63.36 100.00
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_mmus_1337 81.65 83.85
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_mmus_1863 93.85 100.00
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_mmus_2022 81.82 91.54
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_mmus_2086 54.26 98.46
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_mmus_2108 97.71 100.00
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_mmus_2428 97.69 100.00
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_mmus_2461 86.82 99.23
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_mmus_2515 96.15 100.00
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_mmus_2580 62.50 73.85
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_mmus_2608 61.97 53.85
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_mmus_2609 87.69 98.46
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_mmus_2680 96.92 100.00
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_mmus_2779 79.31 87.69
Please wait, loading
Please wait, loading
Please wait, loading
22. retro_mmus_2842 61.11 81.54
Please wait, loading
Please wait, loading
Please wait, loading
23. retro_mmus_3161 67.50 90.77
Please wait, loading
Please wait, loading
Please wait, loading
24. retro_mmus_3293 71.21 100.00
Please wait, loading
Please wait, loading
Please wait, loading
25. retro_mmus_3304 68.83 59.23
Please wait, loading
Please wait, loading
Please wait, loading
26. retro_mmus_3348 82.11 94.62
Please wait, loading
Please wait, loading
Please wait, loading
27. retro_mmus_3352 66.67 66.92
Please wait, loading
Please wait, loading
Please wait, loading
28. retro_mmus_3442 61.07 100.00
Please wait, loading
Please wait, loading
Please wait, loading
29. retro_mmus_3482 65.71 53.08
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000008683 retrocopies