RetrogeneDB - Parental gene ENSTBEG00000009956 details

                            
>ENSTBEG00000009956
ATGGCTCGAATGAACCGCCCAGCTCCAGTGGAAGTCACATACAAGAACATGAGATTTCTTATTACACACAATCCAACCAA

TGCGACCTTAAACAAATTTATAGAGGAACTTAAGAAGTATGGAGTTACCACAATAGTAAGAGTATGTGAAGCAACTTATG

ACACAACACTTGTGGAGAAAGAAGGCATCCATGTTCTCGATTGGCCTTTTGATGATGGTGCACCACCATCCAACCAGATT

GTTGATGACTGGTTAAGTCTTGTAAAAATTAAGTTTCGTGAAGAACCTGGTTGTTGTATTGCTGTTCATTGTGTTGCAGG

CCTTGGGAGAGCTCCAGTGCTAGTTGCCCTAGCATTAATTGAAGGTGGAATGAAATATGAAGATGCAGTACAATTCATAA

GACAAAAGCGGCGTGGAGCTTTTAACAGCAAGCAACTTTTATATTTGGAGAAGTATCGCCCTAAAATGCGGCTGCGCTTC

AAAGACTCCAATGGTCATAGAAACAACTGTTGCGTTCAATAA

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000002438	possible_ortholog	3 retrogenes	retro_amel_1102, retro_amel_1344, retro_amel_1590,
Bos taurus	ENSBTAG00000002275	ortholog_one2many	3 retrogenes	retro_btau_1051, retro_btau_1186, retro_btau_859,
Canis familiaris	ENSCAFG00000002490	possible_ortholog	3 retrogenes	retro_cfam_1832, retro_cfam_206, retro_cfam_593,
Callithrix jacchus	ENSCJAG00000001743	possible_ortholog	3 retrogenes	retro_cjac_2812, retro_cjac_4144, retro_cjac_910,
Cavia porcellus	ENSCPOG00000025759	possible_ortholog	5 retrogenes	retro_cpor_1137, retro_cpor_1233, retro_cpor_1392, retro_cpor_552, retro_cpor_58,
Dasypus novemcinctus	ENSDNOG00000018507	possible_ortholog	4 retrogenes	retro_dnov_1850, retro_dnov_278, retro_dnov_692, retro_dnov_996,
Dipodomys ordii	ENSDORG00000009960	possible_ortholog	6 retrogenes	retro_dord_148, retro_dord_244, retro_dord_355, retro_dord_375, retro_dord_696, retro_dord_92,
Equus caballus	ENSECAG00000022483	ortholog_one2many	6 retrogenes	retro_ecab_10, retro_ecab_1075, retro_ecab_20, retro_ecab_425, retro_ecab_783, retro_ecab_869,
Erinaceus europaeus	ENSEEUG00000006477	possible_ortholog	3 retrogenes	retro_eeur_227, retro_eeur_626, retro_eeur_687,
Echinops telfairi	ENSETEG00000008183	ortholog_one2many	6 retrogenes	retro_etel_1485, retro_etel_1681, retro_etel_1698, retro_etel_18, retro_etel_2153, retro_etel_668,
Felis catus	ENSFCAG00000001199	possible_ortholog	3 retrogenes	retro_fcat_1439, retro_fcat_335, retro_fcat_969,
Homo sapiens	ENSG00000112245	possible_ortholog	5 retrogenes	retro_hsap_2171, retro_hsap_3212, retro_hsap_479, retro_hsap_4798, retro_hsap_807,
Gorilla gorilla	ENSGGOG00000022521	possible_ortholog	7 retrogenes	retro_ggor_1723, retro_ggor_2180, retro_ggor_2251, retro_ggor_2986, retro_ggor_452, retro_ggor_662, retro_ggor_763,
Latimeria chalumnae	ENSLACG00000007183	ortholog_one2many	1 retrogene	retro_lcha_90,
Loxodonta africana	ENSLAFG00000006572	ortholog_one2many	8 retrogenes	retro_lafr_1054, retro_lafr_1120, retro_lafr_1133, retro_lafr_328, retro_lafr_670, retro_lafr_7, retro_lafr_780, retro_lafr_939,
Myotis lucifugus	ENSMLUG00000001162	ortholog_many2many	1 retrogene	retro_mluc_264,
Macaca mulatta	ENSMMUG00000002777	possible_ortholog	1 retrogene	retro_mmul_1720,
Monodelphis domestica	ENSMODG00000018701	ortholog_one2many	5 retrogenes	retro_mdom_1630, retro_mdom_1864, retro_mdom_363, retro_mdom_729, retro_mdom_927,
Mustela putorius furo	ENSMPUG00000003118	possible_ortholog	1 retrogene	retro_mputfur_17,
Mus musculus	ENSMUSG00000026064	possible_ortholog	10 retrogenes	retro_mmus_1192, retro_mmus_1830, retro_mmus_1874, retro_mmus_1891, retro_mmus_2138, retro_mmus_2876, retro_mmus_2985, retro_mmus_3053, retro_mmus_3527, retro_mmus_575,
Nomascus leucogenys	ENSNLEG00000000440	ortholog_one2many	6 retrogenes	retro_nleu_1111, retro_nleu_1159, retro_nleu_1681, retro_nleu_169, retro_nleu_407, retro_nleu_893,
Oryctolagus cuniculus	ENSOCUG00000006311	possible_ortholog	4 retrogenes	retro_ocun_225, retro_ocun_226, retro_ocun_24, retro_ocun_26,
Ochotona princeps	ENSOPRG00000004938	possible_ortholog	4 retrogenes	retro_opri_246, retro_opri_511, retro_opri_692, retro_opri_973,
Procavia capensis	ENSPCAG00000001271	possible_ortholog	8 retrogenes	retro_pcap_183, retro_pcap_249, retro_pcap_291, retro_pcap_338, retro_pcap_367, retro_pcap_425, retro_pcap_431, retro_pcap_76,
Pongo abelii	ENSPPYG00000016743	ortholog_one2many	5 retrogenes	retro_pabe_2058, retro_pabe_255, retro_pabe_2660, retro_pabe_3732, retro_pabe_721,
Pan troglodytes	ENSPTRG00000018314	possible_ortholog	4 retrogenes	retro_ptro_1657, retro_ptro_2239, retro_ptro_3190, retro_ptro_360,
Pteropus vampyrus	ENSPVAG00000015225	ortholog_one2many	2 retrogenes	retro_pvam_487, retro_pvam_848,
Rattus norvegicus	ENSRNOG00000011771	possible_ortholog	4 retrogenes	retro_rnor_1591, retro_rnor_2798, retro_rnor_494, retro_rnor_827,
Rattus norvegicus	ENSRNOG00000046370	possible_ortholog	4 retrogenes	retro_rnor_2349, retro_rnor_2868, retro_rnor_612, retro_rnor_971,
Tupaia belangeri	ENSTBEG00000006790	within_species_paralog	1 retrogene	retro_tbel_4601,
Tarsius syrichta	ENSTSYG00000004632	possible_ortholog	2 retrogenes	retro_tsyr_1011, retro_tsyr_1152,
Tursiops truncatus	ENSTTRG00000004129	ortholog_one2many	6 retrogenes	retro_ttru_34, retro_ttru_450, retro_ttru_571, retro_ttru_642, retro_ttru_643, retro_ttru_69,
Vicugna pacos	ENSVPAG00000004277	possible_ortholog	9 retrogenes	retro_vpac_167, retro_vpac_201, retro_vpac_275, retro_vpac_427, retro_vpac_476, retro_vpac_496, retro_vpac_535, retro_vpac_560, retro_vpac_583,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_tbel_23	93.64	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_tbel_869	86.71	100.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_tbel_1216	71.64	76.30	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_tbel_1392	82.50	91.33	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_tbel_2167	61.08	94.22	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_tbel_2236	81.68	74.57	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_tbel_2549	81.82	94.80	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_tbel_2570	90.91	100.00	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_tbel_2611	81.50	98.27	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_tbel_3144	84.38	55.49	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_tbel_3295	73.75	92.49	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_tbel_3424	81.00	56.65	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_tbel_4074	72.63	100.00	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_tbel_4123	90.80	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSTBEG00000009956 retrocopies

Parental gene:	ENSTBEG00000009956
Aliases:	None
Description:	None
Organism:	*Treeshrew (Tupaia belangeri)*
Coordinates:	scaffold_118807:403598..407055(+)

Parental gene:

ENSTBEG00000009956