Parental gene:

EIF2S2, ENSPPYG00000010933

Aliases:None
Description:eukaryotic translation initiation factor 2 subunit 2 [Source:RefSeq peptide;Acc:NP_001127646]
Organism:Orangutan (Pongo abelii)
Coordinates:20:31263503..31288133(-)


>ENSPPYG00000010933
ATGTCTGGGGACGAGATGATTTTTGATCCTACTATGAGCAAGAAGAAAAAGAAGAAGAAGAAGCCTTTTATGTTAGATGA
GGAAGGGGATACCCAAACAGAGGAAACCCAGCCTTCAGAAACAAAAGAAGTGGAGCCAGAGCCAACTGAGGACAAAGATT
TGGAAGCTGATGAAGAGGATACTAGGAAAAAAGATGCTTCTGATGATCTAGATGACTTGAACTTCTTTAATCAAAAGAAA
AAGAAGAAAAAAACTAAAAAGATATTTGATATTGATGAAGCTGAAGAAGGTGTAAAGGATCTTAAGATTGAAAGTGATGT
TCAAGAACCAACTGAACCAGAGGATGACCTTGACATTATGCTTGGCAATAAAAAGAAGAAAAAGAAGAATGTTAAGTTCC
CAGATGAGGATGAAATACTAGAGAAAGATGAAGCTCTAGAAGATGAAGACAACAAAAAAGATGATGGTATCTCATTCAGT
AATCAGACAGGCCCTGCTTGGGCAGGCTCAGAAAGAGACTACACATACGAGGAGCTGCTGAATCGAGTGTTCAACATCAT
GAGGGAAAAGAATCCAGATATGGTTGCTGGGGAGAAAAGGAAATTTGTCATGAAACCTCCACAGGTCGTCCGAGTAGGAA
CCAAGAAAACTTCTTTTGTCAACTTTACAGATATCTGTAAACTATTACATCGTCAGCCCAAACATCTCCTTGCATTTTTG
TTGGCTGAATTGGGTACAAGTGGTTCTATAGATGGTAATAACCAACTTGTAATCAAAGGAAGATTCCAACAGAAACAGAT
AGAAAATGTCTTGAGAAGATATATCAAGGAATATGTCACTTGTCACACATGCCGATCACCGGACACAATCCTGCAGAAGG
ACACGCGACTCTATTTCCTACAGTGCGAAACTTGTCATTCTAGATGTTCTGTTGCCAGTATCAAAACCGGCTTCCAGGCT
GTCACGGGCAAGCGAGCACAGCTCCGTGCCAAAGCTAACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 37 .98 RPM
SRP007412_cerebellum 51 .80 RPM
SRP007412_heart 35 .25 RPM
SRP007412_kidney 39 .01 RPM
SRP007412_liver 44 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007498 possible_ortholog 1 retrogene
retro_cfam_2070,
Choloepus hoffmanni ENSCHOG00000006521 possible_ortholog 1 retrogene
retro_chof_271,
Callithrix jacchus ENSCJAG00000018334 ortholog_many2many 2 retrogenes
retro_cjac_4196, retro_cjac_697,
Cavia porcellus ENSCPOG00000015439 possible_ortholog 1 retrogene
retro_cpor_1143,
Echinops telfairi ENSETEG00000001922 possible_ortholog 1 retrogene
retro_etel_1101,
Homo sapiens ENSG00000125977 ortholog_one2one 3 retrogenes
retro_hsap_2176, retro_hsap_2260, retro_hsap_713,
Gorilla gorilla ENSGGOG00000015546 ortholog_one2one 5 retrogenes
retro_ggor_1683, retro_ggor_1726, retro_ggor_2007, retro_ggor_280, retro_ggor_604,
Microcebus murinus ENSMICG00000006944 ortholog_one2many 1 retrogene
retro_mmur_1583,
Myotis lucifugus ENSMLUG00000005335 possible_ortholog 1 retrogene
retro_mluc_604,
Macaca mulatta ENSMMUG00000018095 ortholog_one2many 1 retrogene
retro_mmul_1483,
Monodelphis domestica ENSMODG00000002805 ortholog_one2many 5 retrogenes
retro_mdom_1981, retro_mdom_365, retro_mdom_368, retro_mdom_370, retro_mdom_837,
Mus musculus ENSMUSG00000074656 possible_ortholog 1 retrogene
retro_mmus_3200,
Nomascus leucogenys ENSNLEG00000010034 ortholog_one2many 2 retrogenes
retro_nleu_2242, retro_nleu_466,
Otolemur garnettii ENSOGAG00000001417 ortholog_many2many 1 retrogene
retro_ogar_196,
Pan troglodytes ENSPTRG00000013412 ortholog_one2one 2 retrogenes
retro_ptro_1600, retro_ptro_508,
Rattus norvegicus ENSRNOG00000017447 possible_ortholog 1 retrogene
retro_rnor_2395,
Tupaia belangeri ENSTBEG00000009970 possible_ortholog 2 retrogenes
retro_tbel_1505, retro_tbel_2508,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1955 65.78 55.86
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2. retro_pabe_2421 72.10 69.67
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Download FASTA sequences of all ENSPPYG00000010933 retrocopies