Parental gene:

EIF2S2, ENSGGOG00000015546

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:20:31450124..31467596(-)


>ENSGGOG00000015546
TTGTCTTTTAAACAGATGATTTTTGATCCTACTATGCCTTTTATGTTAGATGAGGAAGGGGATACCCAAACAGAGGAAAC
CCAGCCTTCAGAAACAAAAGAAGTGGAGCCAGAGCCAACTGAGGACAAAGATTTGGAAGCTGATGAAGAGGACACTAGGA
AAAAAGATGCTTCTGATGATCTAGATGACTTGAACTTCTTTAATCAAAAGAAAAAGAAGAAAAAAACTAAAAAGATATTT
GATATTGATGAAGCTGAAGAAGGTGTAAAGGATCTTAAGATTGAAAGTGATGTTCAAGAACCAACTGAACCAGAGGATGA
CCTTGACATTATGCTTGGCAATAAAAAGAAGAAAAAGAAGAATGTTAAGTTCCCAGATGAGGATGAAATACTAGAGAAAG
ATGAAGCTCTAGAAGATGAAGACAACAAAAAAGATGATGGTATCTCATTCAGTAATCAGACAGGCCCTGCTTGGGCAGGC
TCAGAAAGAGACTACACATACGAGGAGCTGCTGAATCGAGTGTTCAACATCATGAGGGAAAAGAATCCAGATATGGTTGC
TGGGGAGAAAAGGAAATTTGTCATGAAACCTCCACAAGTCGTCCGAGTAGGAACCAAGAAAACTTCTTTTGTCAACTTTA
CAGATATCTGTAAACTATTACATCGTCAGCCCAAACATCTCCTTGCATTTTTGTTGGCTGAATTGGGTACAAGTGGTTCT
ATAGATGGTAATAACCAACTTGTAATCAAAGGAAGATTCCAACAGAAACAGATAGAAAATGTCTTGAGAAGATATATCAA
GGAATATGTCACTTGTCACACATGCCGATCACCGGACACAATCCTGCAGAAGGACACGCGACTCTATTTCCTACAGTGCG
AAACTTGTCATTCTAGATGTTCTGTTGCCAGTATCAAAACCGGCTTCCAGGCTGTCACGGGCAAGCGAGCACAGCTCCGT
GCCAAAGCTAACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 21 .34 RPM
SRP007412_cerebellum 20 .37 RPM
SRP007412_heart 8 .69 RPM
SRP007412_kidney 41 .34 RPM
SRP007412_liver 25 .32 RPM
SRP007412_testis 52 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018334 ortholog_one2many 2 retrogenes
retro_cjac_4196, retro_cjac_697,
Cavia porcellus ENSCPOG00000015439 possible_ortholog 1 retrogene
retro_cpor_1143,
Echinops telfairi ENSETEG00000001922 possible_ortholog 1 retrogene
retro_etel_1101,
Homo sapiens ENSG00000125977 ortholog_one2one 3 retrogenes
retro_hsap_2176, retro_hsap_2260, retro_hsap_713,
Microcebus murinus ENSMICG00000006944 ortholog_one2one 1 retrogene
retro_mmur_1583,
Macaca mulatta ENSMMUG00000018095 ortholog_one2one 1 retrogene
retro_mmul_1483,
Monodelphis domestica ENSMODG00000002805 ortholog_one2one 5 retrogenes
retro_mdom_1981, retro_mdom_365, retro_mdom_368, retro_mdom_370, retro_mdom_837,
Nomascus leucogenys ENSNLEG00000010034 ortholog_one2one 2 retrogenes
retro_nleu_2242, retro_nleu_466,
Otolemur garnettii ENSOGAG00000001417 ortholog_one2many 1 retrogene
retro_ogar_196,
Pongo abelii ENSPPYG00000010933 ortholog_one2one 2 retrogenes
retro_pabe_1955, retro_pabe_2421,
Pan troglodytes ENSPTRG00000013412 ortholog_one2one 2 retrogenes
retro_ptro_1600, retro_ptro_508,
Rattus norvegicus ENSRNOG00000017447 possible_ortholog 1 retrogene
retro_rnor_2395,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_280 67.63 53.09
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2. retro_ggor_604 89.43 75.93
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3. retro_ggor_1683 66.27 50.93
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4. retro_ggor_1726 93.59 96.30
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5. retro_ggor_2007 83.88 74.69
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Download FASTA sequences of all ENSGGOG00000015546 retrocopies