Parental gene:

EIF2S2, ENSCAFG00000007498

Aliases:None
Description:eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa [Source:HGNC Symbol;Acc:3266]
Organism:Dog (Canis familiaris)
Coordinates:24:23269602..23283276(-)


>ENSCAFG00000007498
TTGTCCTTTAAACAGATGATTTTTGATCCTACTATGAGCAAGAAGAAAAAGAAGAAGAAGAAGCCTTTTATGTTAGATGA
GGAAGGGGATGCCCAGACGGAAGAAACCCAGCCCTCAGAAACAAAAGAAGTAGAACCAGAGCCAACTGAGGACAAAGATG
TAGAAGCTGATGAAGAGGACAGTAGGAAAAAGGATGCTTCTGATGATTTAGATGACTTGAACTTCTTTAATCAGAAGAAA
AAGAAGAAAAAAACAAAAAAGATATTTGATATTGATGAAGCTGAAGAAGGTGTAAAGGATCTTAAGATCGAAAGTGATAT
CCAAGAACCAGCTGAACCAGAGGATGACCTTGACATTATGCTTGGCAATAAAAAGAAGAAAAAGAAGAACGTTAAGTTCC
CAGATGAGGATGAAATACTAGAGAAAGATGAAGCTTTAGAAGATGAAGACAGCAAAAAAGATGATGGTATCTCATTCAGT
AACCAGACAGGTCCTGCTTGGGCAGGCTCCGAAAGAGACTACACGTATGAGGAGCTACTGAATCGAGTGTTCAACATTAT
GAGGGAAAAGAATCCAGATATGGTTGCTGGAGAAAAAAGGAAATTTGTCATGAAACCTCCACAGGTTGTCCGAGTAGGAA
CAAAGAAAACTTCTTTTGTCAACTTTACAGATATCTGTAAACTATTACATCGTCAGCCCAAACATCTTCTTGCATTTTTA
TTGGCTGAATTGGGTACAAGTGGTTCTATAGATGGTAATAATCAACTTGTAATCAAAGGAAGATTCCAACAGAAACAGAT
AGAAAATGTTTTGAGAAGATATATCAAGGAATACGTTACCTGTCATACGTGCCGATCACCGGACACAATCCTGCAAAAGG
ACACCCGACTCTATTTCTTACAGTGCGAAACTTGTCATTCTCGATGCTCTGTTGCCAGCATCAAAACCGGCTTCCAGGCT
GTCACAGGCAAGCGAGCACAGCTCCGTGCCAAAGCTAACTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 41 .79 RPM
SRP017611_brain 26 .83 RPM
SRP017611_kidney 40 .81 RPM
SRP017611_liver 15 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006521 ortholog_one2one 1 retrogene
retro_chof_271,
Callithrix jacchus ENSCJAG00000018334 possible_ortholog 2 retrogenes
retro_cjac_4196, retro_cjac_697,
Cavia porcellus ENSCPOG00000015439 ortholog_one2many 1 retrogene
retro_cpor_1143,
Echinops telfairi ENSETEG00000001922 ortholog_one2many 1 retrogene
retro_etel_1101,
Myotis lucifugus ENSMLUG00000005335 ortholog_one2one 1 retrogene
retro_mluc_604,
Monodelphis domestica ENSMODG00000002805 ortholog_one2one 5 retrogenes
retro_mdom_1981, retro_mdom_365, retro_mdom_368, retro_mdom_370, retro_mdom_837,
Mus musculus ENSMUSG00000074656 ortholog_one2one 1 retrogene
retro_mmus_3200,
Otolemur garnettii ENSOGAG00000001417 possible_ortholog 1 retrogene
retro_ogar_196,
Pongo abelii ENSPPYG00000010933 possible_ortholog 2 retrogenes
retro_pabe_1955, retro_pabe_2421,
Rattus norvegicus ENSRNOG00000017447 ortholog_one2many 1 retrogene
retro_rnor_2395,
Tupaia belangeri ENSTBEG00000009970 ortholog_one2one 2 retrogenes
retro_tbel_1505, retro_tbel_2508,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2070 88.59 100.00
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Download FASTA sequences of all ENSCAFG00000007498 retrocopies