Parental gene:

ENSMMUG00000021313

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:4:42765133..42770486(+)


>ENSMMUG00000021313
CAATTTTCTGCATCAGGGCAAAGAAAAATCCCTTTGGTTCCAGAAAATCTGCTGAAAAAGAGGAAGGCTTATCAAGCCCT
CAAAGCCACCCAGGCAAAGCAGGCACTTTTGGCAAAGAAGGAGCAGAGGAAAGGAAAAGGGCTCAGGTTTAAGCGACTGG
AATCATTCCTACATGATTCCTGGCGGCAGAAACGTGACAAGGTGCGTCTCAGACGACTAGAAGTGAAACCTCATGCCTTG
GAATTGCCAGACAAACATTCCTTGGCCTTTGTTGTACGCATCGAAAGGATTGATGGCGTGAGTTTATTGGTGCAGAGAAC
CATTGCAAGACTTCGCCTAAAGAAAATTTTTAGTGGTGTCTTTGTAAAAGTCACCCCCCAGAACCTAAAAATGCTGCGTA
TAGTGGAACCTTATGTGACCTGGGGATTTCCAAATCTGAAGTCTGTCCGAGAACTCATTTTGAAACGTGGACAAGCCAAG
GTCAAGAATAAGACCATCCCTCTGACAGACAACACAGTGATTGAGGAGCACCTGGGGAAGTTTGGCGTCATTTGCTTGGA
AGACCTCATTCATGAAATTGCCTTCCCAGGGAAGCATTTCCAGGAGATCTCATGGTTCTGCCCTTTCCACCTCTCAGTGG
CCCGACATGCTACCAAAAATAGAGTGGGCTTCCTCAAGGAGATGGGCACACCTGGCTATCGGGGTGAACGCATCAATCAG
CTCATCCGCCAGCTGAACTAG

Library Parental gene expression (RPM)
SRP007412_brain 2 .02 RPM
SRP007412_brain_prefrontal_cortex 6 .03 RPM
SRP007412_cerebellum 2 .20 RPM
SRP007412_heart 1 .00 RPM
SRP007412_kidney 1 .64 RPM
SRP007412_liver 1 .27 RPM
SRP007412_testis 1 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012791 ortholog_one2many 2 retrogenes
retro_amel_1260, retro_amel_243,
Bos taurus ENSBTAG00000018478 ortholog_one2many 2 retrogenes
retro_btau_588, retro_btau_816,
Canis familiaris ENSCAFG00000001728 ortholog_many2many 4 retrogenes
retro_cfam_1180, retro_cfam_1464, retro_cfam_1638, retro_cfam_330,
Choloepus hoffmanni ENSCHOG00000000306 ortholog_one2many 4 retrogenes
retro_chof_1168, retro_chof_1404, retro_chof_388, retro_chof_478,
Cavia porcellus ENSCPOG00000021189 possible_ortholog 2 retrogenes
retro_cpor_1134, retro_cpor_653,
Dasypus novemcinctus ENSDNOG00000013485 ortholog_one2many 1 retrogene
retro_dnov_689,
Equus caballus ENSECAG00000003113 ortholog_one2many 1 retrogene
retro_ecab_998,
Erinaceus europaeus ENSEEUG00000010431 ortholog_one2many 1 retrogene
retro_eeur_90,
Echinops telfairi ENSETEG00000002419 ortholog_one2many 3 retrogenes
retro_etel_1151, retro_etel_1823, retro_etel_542,
Felis catus ENSFCAG00000009707 ortholog_one2many 1 retrogene
retro_fcat_143,
Gorilla gorilla ENSGGOG00000009958 ortholog_many2many 15 retrogenes
retro_ggor_1009, retro_ggor_1013, retro_ggor_1253, retro_ggor_1261, retro_ggor_1904, retro_ggor_2099, retro_ggor_2108, retro_ggor_2113, retro_ggor_2162, retro_ggor_2282, retro_ggor_2457, retro_ggor_2524, retro_ggor_2591, retro_ggor_2659, retro_ggor_2973,
Macaca mulatta ENSMMUG00000005141 within_species_paralog 1 retrogene
retro_mmul_129,
Monodelphis domestica ENSMODG00000019028 ortholog_one2many 1 retrogene
retro_mdom_1708,
Mustela putorius furo ENSMPUG00000013296 ortholog_one2many 1 retrogene
retro_mputfur_1577,
Mus musculus ENSMUSG00000063888 possible_ortholog 4 retrogenes
retro_mmus_2359, retro_mmus_3172, retro_mmus_3626, retro_mmus_777,
Oryctolagus cuniculus ENSOCUG00000003844 possible_ortholog 6 retrogenes
retro_ocun_1393, retro_ocun_1604, retro_ocun_1818, retro_ocun_278, retro_ocun_509, retro_ocun_598,
Otolemur garnettii ENSOGAG00000012671 possible_ortholog 3 retrogenes
retro_ogar_1380, retro_ogar_3358, retro_ogar_3428,
Pongo abelii ENSPPYG00000016619 ortholog_one2many 21 retrogenes
retro_pabe_1064, retro_pabe_1069, retro_pabe_1315, retro_pabe_1341, retro_pabe_1370, retro_pabe_1379, retro_pabe_1457, retro_pabe_2078, retro_pabe_2154, retro_pabe_2354, retro_pabe_2527, retro_pabe_2543, retro_pabe_2598, retro_pabe_2609, retro_pabe_2644, retro_pabe_2988, retro_pabe_3053, retro_pabe_3259, retro_pabe_3410, retro_pabe_3714, retro_pabe_3753,
Pteropus vampyrus ENSPVAG00000008696 ortholog_one2many 3 retrogenes
retro_pvam_1179, retro_pvam_1482, retro_pvam_975,
Rattus norvegicus ENSRNOG00000016269 possible_ortholog 1 retrogene
retro_rnor_2795,
Sorex araneus ENSSARG00000005286 ortholog_one2many 2 retrogenes
retro_sara_100, retro_sara_211,
Sarcophilus harrisii ENSSHAG00000011219 ortholog_one2many 1 retrogene
retro_shar_216,
Sus scrofa ENSSSCG00000026472 ortholog_one2many 3 retrogenes
retro_sscr_198, retro_sscr_756, retro_sscr_807,
Ictidomys tridecemlineatus ENSSTOG00000009841 possible_ortholog 2 retrogenes
retro_itri_1233, retro_itri_417,
Tarsius syrichta ENSTSYG00000004848 possible_ortholog 16 retrogenes
retro_tsyr_1312, retro_tsyr_1340, retro_tsyr_1380, retro_tsyr_1399, retro_tsyr_1729, retro_tsyr_1914, retro_tsyr_1933, retro_tsyr_2161, retro_tsyr_357, retro_tsyr_455, retro_tsyr_469, retro_tsyr_581, retro_tsyr_606, retro_tsyr_642, retro_tsyr_703, retro_tsyr_856,
Tursiops truncatus ENSTTRG00000006971 ortholog_one2many 6 retrogenes
retro_ttru_1194, retro_ttru_171, retro_ttru_361, retro_ttru_498, retro_ttru_528, retro_ttru_915,
Vicugna pacos ENSVPAG00000008894 ortholog_one2many 2 retrogenes
retro_vpac_386, retro_vpac_584,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_11 99.17 97.56
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Download FASTA sequences of all ENSMMUG00000021313 retrocopies