Parental gene:

GABARAP, ENSMMUG00000010545

Aliases:None
Description:GABA(A) receptor-associated protein [Source:RefSeq peptide;Acc:NP_001247958]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:16:6970055..6972080(-)


>ENSMMUG00000010545
ATGAAGTTCGTGTACAAAGAAGAGCATCCGTTCGAGAAGCGCCGCTCTGAGGGCGAGAAAATCCGAAAGAAATACCCGGA
CCGGGTGCCGGTGATAGTAGAAAAGGCTCCCAAAGCTCGGATAGGAGACCTGGACAAAAAGAAATACCTGGTGCCTTCTG
ATCTCACAGTTGGTCAGTTCTACTTCTTGATCCGGAAGCGAATTCATCTCCGAGCTGAGGATGCCTTGTTTTTCTTTGTC
AACAATGTCATTCCACCCACCAGTGCCACAATGGGTCAGCTCTACCAGGAACACCATGAAGAAGACTTCTTTCTCTACAT
TGCCTACAGTGACGAGAGTGTCTACGGTCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain 35 .86 RPM
SRP007412_brain_prefrontal_cortex 89 .01 RPM
SRP007412_cerebellum 26 .99 RPM
SRP007412_heart 34 .74 RPM
SRP007412_kidney 70 .19 RPM
SRP007412_liver 59 .14 RPM
SRP007412_testis 74 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014883 possible_ortholog 1 retrogene
retro_btau_905,
Ciona intestinalis ENSCING00000012473 ortholog_one2many 1 retrogene
retro_cint_25,
Callithrix jacchus ENSCJAG00000016655 ortholog_one2many 2 retrogenes
retro_cjac_2851, retro_cjac_3820,
Dipodomys ordii ENSDORG00000005229 possible_ortholog 1 retrogene
retro_dord_308,
Echinops telfairi ENSETEG00000004652 possible_ortholog 7 retrogenes
retro_etel_1020, retro_etel_1078, retro_etel_1562, retro_etel_2068, retro_etel_493, retro_etel_666, retro_etel_976,
Gorilla gorilla ENSGGOG00000013770 ortholog_one2many 1 retrogene
retro_ggor_821,
Loxodonta africana ENSLAFG00000000744 possible_ortholog 1 retrogene
retro_lafr_61,
Macaca mulatta ENSMMUG00000002197 within_species_paralog 1 retrogene
retro_mmul_2235,
Macaca mulatta ENSMMUG00000005759 within_species_paralog 2 retrogenes
retro_mmul_2369, retro_mmul_540,
Macaca mulatta ENSMMUG00000017613 within_species_paralog 1 retrogene
retro_mmul_15,
Mustela putorius furo ENSMPUG00000010473 possible_ortholog 2 retrogenes
retro_mputfur_1290, retro_mputfur_258,
Mus musculus ENSMUSG00000018567 ortholog_one2many 1 retrogene
retro_mmus_3107,
Nomascus leucogenys ENSNLEG00000008049 ortholog_one2many 2 retrogenes
retro_nleu_1670, retro_nleu_4,
Oryctolagus cuniculus ENSOCUG00000006997 ortholog_one2many 1 retrogene
retro_ocun_311,
Otolemur garnettii ENSOGAG00000004388 possible_ortholog 2 retrogenes
retro_ogar_1212, retro_ogar_1224,
Pongo abelii ENSPPYG00000007901 ortholog_one2many 1 retrogene
retro_pabe_122,
Pan troglodytes ENSPTRG00000034115 ortholog_one2many 1 retrogene
retro_ptro_60,
Rattus norvegicus ENSRNOG00000017417 ortholog_one2many 2 retrogenes
retro_rnor_1818, retro_rnor_2093,
Sus scrofa ENSSSCG00000017936 possible_ortholog 1 retrogene
retro_sscr_163,
Drosophila melanogaster FBgn0052672 ortholog_many2many 1 retrogene
retro_dmel_23,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_155 100.00 100.00
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Download FASTA sequences of all ENSMMUG00000010545 retrocopies