Parental gene:

YY1, ENSGGOG00000026332

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:14:82200531..82238808(+)


>ENSGGOG00000026332
ATGGCCTCGGGCGACACCCTCTACATCGCCACGGACGGCTCGGAGATGCCGGCCGAGATCGTGGAGCTGCACGAGATCGA
GGTGGAGACCATCCCGGTGGAGACCATCGAGACCACAGTGGTGGGCGAAGAGGAGGAGGAGGACGACGACGACGAGGACG
GCGGCGGTGGCGACCACGGCGGCGGGGGCGGCCACGGGCACGCCGGCCACCACCACCACCACCATCACCACCACCACCAC
CCGCCCATGATCGCTCTGCAGCCGCTGGTCACCGACGACCCGACCCAGGTGCACCACCACCAGGAGGTGATCCTGGTGCA
GACGCGCGAGGAGGTGGTGGGCGGCGACGACTCGGACGGGTTGCGCGCCGAGGACGGCTTCGAGGATCAGATTCTCATCC
CGGTGCCCGCGCCGGCCGGCGGCGACGACGACTACATTGAACAAACGCTGGTCACCGTGGCGGCGGCCGGCAAGAGCGGC
GGCGGCGGCTCGTCGTCGTCGGGAGGCGGCCGCGTCAAGAAGGGCGGCGGCAAGAAGAGCGGCAAGAAGAGTTACCTCAG
CGGCGGGGCCGGCGCGGCGGGCGGCGGCGGCGCCGACCCGGGCAACAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAGA
CCCTGGAGGGCGAGTTCTCGGTCACCATGTGGTCCTCAGATGAAAAAAAAGATATTGACCATGAGACAGTGGTTGAAGAA
CAGATCATTGGAGAGAACTCACCTCCTGATTATTCAGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGG
CATTGACCTCTCAGATCCCAAACAACTGGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAA
GAACAATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCAC
GGTCCCAGAGTCCACGTCTGTGCAGAATGTGGCAAAGCTTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCA
TACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAGGCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACATG
TGCGAATCCATACCGGAGACAGGCCCTATGTGTGCCCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTG
AAATCTCACATCTTAACACATGCTAAGGCCAAAAACAACCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .84 RPM
SRP007412_cerebellum 18 .87 RPM
SRP007412_heart 5 .97 RPM
SRP007412_kidney 29 .32 RPM
SRP007412_liver 25 .96 RPM
SRP007412_testis 44 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011146 possible_ortholog 1 retrogene
retro_amel_2,
Bos taurus ENSBTAG00000020819 possible_ortholog 1 retrogene
retro_btau_91,
Callithrix jacchus ENSCJAG00000016853 ortholog_one2many 2 retrogenes
retro_cjac_1931, retro_cjac_4045,
Cavia porcellus ENSCPOG00000020809 possible_ortholog 2 retrogenes
retro_cpor_1220, retro_cpor_1522,
Equus caballus ENSECAG00000005805 possible_ortholog 1 retrogene
retro_ecab_97,
Homo sapiens ENSG00000100811 ortholog_one2one 2 retrogenes
retro_hsap_106, retro_hsap_97,
Mustela putorius furo ENSMPUG00000002931 possible_ortholog 1 retrogene
retro_mputfur_867,
Mus musculus ENSMUSG00000021264 possible_ortholog 1 retrogene
retro_mmus_190,
Nomascus leucogenys ENSNLEG00000000999 ortholog_one2one 3 retrogenes
retro_nleu_1092, retro_nleu_116, retro_nleu_2225,
Oryctolagus cuniculus ENSOCUG00000026938 possible_ortholog 1 retrogene
retro_ocun_1871,
Otolemur garnettii ENSOGAG00000006955 ortholog_one2one 4 retrogenes
retro_ogar_1231, retro_ogar_1804, retro_ogar_1857, retro_ogar_289,
Pongo abelii ENSPPYG00000025949 ortholog_one2one 3 retrogenes
retro_pabe_145, retro_pabe_3616, retro_pabe_534,
Pan troglodytes ENSPTRG00000006717 ortholog_one2one 3 retrogenes
retro_ptro_3093, retro_ptro_45, retro_ptro_494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2 63.33 65.22
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2. retro_ggor_190 66.98 51.21
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Download FASTA sequences of all ENSGGOG00000026332 retrocopies