Parental gene:

YY1, ENSG00000100811

Aliases:None
Description:YY1 transcription factor [Source:HGNC Symbol;Acc:12856]
Organism:Human (Homo sapiens)
Coordinates:14:100704634..100749129(+)


>ENSG00000100811
ATGGCCTCGGGCGACACCCTCTACATCGCCACGGACGGCTCGGAGATGCCGGCCGAGATCGTGGAGCTGCACGAGATCGA
GGTGGAGACCATCCCGGTGGAGACCATCGAGACCACAGTGGTGGGCGAGGAGGAGGAGGAGGACGACGACGACGAGGACG
GCGGCGGTGGCGACCACGGCGGCGGGGGCGGCCACGGGCACGCCGGCCACCACCACCACCACCATCACCACCACCACCAC
CCGCCCATGATCGCTCTGCAGCCGCTGGTCACCGACGACCCGACCCAGGTGCACCACCACCAGGAGGTGATCCTGGTGCA
GACGCGCGAGGAGGTGGTGGGCGGCGACGACTCGGACGGGCTGCGCGCCGAGGACGGCTTCGAGGATCAGATTCTCATCC
CGGTGCCCGCGCCGGCCGGCGGCGACGACGACTACATTGAACAAACGCTGGTCACCGTGGCGGCGGCCGGCAAGAGCGGC
GGCGGCGGCTCGTCGTCGTCGGGAGGCGGCCGCGTCAAGAAGGGCGGCGGCAAGAAGAGCGGCAAGAAGAGTTACCTCAG
CGGCGGGGCCGGCGCGGCGGGCGGCGGCGGCGCCGACCCGGGCAACAAGAAGTGGGAGCAGAAGCAGGTGCAGATCAAGA
CCCTGGAGGGCGAGTTCTCGGTCACCATGTGGTCCTCAGATGAAAAAAAAGATATTGACCATGAGACAGTGGTTGAAGAA
CAGATCATTGGAGAGAACTCACCTCCTGATTATTCAGAATATATGACAGGAAAGAAACTTCCTCCTGGAGGAATACCTGG
CATTGACCTCTCAGATCCCAAACAACTGGCAGAATTTGCTAGAATGAAGCCAAGAAAAATTAAAGAAGATGATGCTCCAA
GAACAATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAACTCGGCCATGAGAAAACATCTGCACACCCAC
GGTCCCAGAGTCCACGTCTGTGCAGAATGTGGCAAAGCTTTTGTTGAGAGTTCAAAACTAAAACGACACCAACTGGTTCA
TACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAGGCTGTGGGAAACGCTTTTCACTGGACTTCAATTTGCGCACACATG
TGCGAATCCATACCGGAGACAGGCCCTATGTGTGCCCCTTCGATGGTTGTAATAAGAAGTTTGCTCAGTCAACTAACCTG
AAATCTCACATCTTAACACATGCTAAGGCCAAAAACAACCAGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 94 .06 RPM
bodymap2_adrenal 114 .34 RPM
bodymap2_brain 90 .36 RPM
bodymap2_breast 109 .69 RPM
bodymap2_colon 145 .12 RPM
bodymap2_heart 76 .08 RPM
bodymap2_kidney 104 .39 RPM
bodymap2_liver 67 .34 RPM
bodymap2_lung 124 .17 RPM
bodymap2_lymph_node 162 .40 RPM
bodymap2_ovary 130 .12 RPM
bodymap2_prostate 130 .21 RPM
bodymap2_skeletal_muscle 109 .93 RPM
bodymap2_testis 123 .98 RPM
bodymap2_thyroid 123 .76 RPM
bodymap2_white_blood_cells 224 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011146 possible_ortholog 1 retrogene
retro_amel_2,
Bos taurus ENSBTAG00000020819 possible_ortholog 1 retrogene
retro_btau_91,
Callithrix jacchus ENSCJAG00000016853 ortholog_one2many 2 retrogenes
retro_cjac_1931, retro_cjac_4045,
Cavia porcellus ENSCPOG00000020809 possible_ortholog 2 retrogenes
retro_cpor_1220, retro_cpor_1522,
Equus caballus ENSECAG00000005805 possible_ortholog 1 retrogene
retro_ecab_97,
Gorilla gorilla ENSGGOG00000026332 ortholog_one2one 2 retrogenes
retro_ggor_190, retro_ggor_2,
Mustela putorius furo ENSMPUG00000002931 possible_ortholog 1 retrogene
retro_mputfur_867,
Mus musculus ENSMUSG00000021264 possible_ortholog 1 retrogene
retro_mmus_190,
Nomascus leucogenys ENSNLEG00000000999 ortholog_one2one 3 retrogenes
retro_nleu_1092, retro_nleu_116, retro_nleu_2225,
Oryctolagus cuniculus ENSOCUG00000026938 possible_ortholog 1 retrogene
retro_ocun_1871,
Otolemur garnettii ENSOGAG00000006955 ortholog_one2one 4 retrogenes
retro_ogar_1231, retro_ogar_1804, retro_ogar_1857, retro_ogar_289,
Pongo abelii ENSPPYG00000025949 ortholog_one2one 3 retrogenes
retro_pabe_145, retro_pabe_3616, retro_pabe_534,
Pan troglodytes ENSPTRG00000006717 ortholog_one2one 3 retrogenes
retro_ptro_3093, retro_ptro_45, retro_ptro_494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_97 60.71 81.16
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2. retro_hsap_106 66.04 51.21
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Download FASTA sequences of all ENSG00000100811 retrocopies