Parental gene:

YY1, ENSBTAG00000020819

Aliases:None
Description:transcriptional repressor protein YY1 [Source:RefSeq peptide;Acc:NP_001091550]
Organism:Cow (Bos taurus)
Coordinates:21:66817738..66842006(+)


>ENSBTAG00000020819
NNCCACCACCACCACCATCACCACCACCACCCGCCCATGATCGCGCTGCAGCCGCTCGTCACCGACGACCCGACCCAGGT
GCACCACCACCAGGAGGTGATCCTGGTGCAGACGCGCGAGGAGGTGGTGGGCGGCGACGACTCGGACGGGCTGCGCGCCG
AGGACGGCTTCGAGGACCAGATCCTCATCCCGGTGCCCGCGCCGGCCGGCGGCGACGACGACTACATCGAGCAGACGCTG
GTCACCGTGGCGGCGGCCGGCAAGAGCGGCGGCGGCGGCGGCGGCTCGTCGTCGTCGGGCGGCGGCCGCGTCAAGAAGGG
CGGCGGCAAGAAGAGCGGCAAGAAGGGCTACCTCGGCGGCGGGGCCGGGGCGGCGGGCGGCGCGGACGCGGGCAACAAGA
AGTGGGAGCAGAAGCAGGTGCAGATCAAGACCCTGGAGGGCGAGTTCTCGGTCACCATGTGGTCCTCAGATGAAAAAAAA
GATATCGACCATGAGACGGTGGTTGAAGAACAGATCATTGGAGAGAACTCACCTCCTGATTATTCAGAATATATGACAGG
AAAGAAACTCCCTCCTGGAGGGATACCTGGCATTGACCTCTCAGATCCCAAACAACTAGCAGAATTTGCTAGAATGAAGC
CAAGAAAAATTAAAGAAGATGATGCTCCAAGAACAATAGCTTGCCCTCATAAAGGCTGCACAAAGATGTTCAGGGATAAC
TCTGCCATGAGAAAACATCTGCACACCCACGGCCCCAGAGTCCACGTCTGTGCAGAGTGTGGCAAAGCTTTTGTTGAGAG
CTCCAAGCTAAAACGACACCAACTGGTCCATACTGGAGAGAAGCCCTTTCAGTGCACGTTCGAAGGCTGCGGGAAACGCT
TTTCACTGGACTTCAATTTGCGCACACATGTGCGAATCCACACCGGAGACAGGCCCTATGTGTGCCCCTTCGACGGTTGT
AATAAGAAGTTTGCTCAGTCAACTAACCTGAAATCTCACATCTTAACACACGCTAAGGCCAAAAACAACCAGTGA

Library Parental gene expression (RPM)
ERP005899_liver 24 .87 RPM
ERP005899_muscle 30 .41 RPM
SRP017611_brain 28 .23 RPM
SRP017611_kidney 31 .24 RPM
SRP017611_liver 17 .67 RPM
SRP030211_testis 52 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011146 ortholog_one2one 1 retrogene
retro_amel_2,
Callithrix jacchus ENSCJAG00000016853 possible_ortholog 2 retrogenes
retro_cjac_1931, retro_cjac_4045,
Cavia porcellus ENSCPOG00000020809 ortholog_one2one 2 retrogenes
retro_cpor_1220, retro_cpor_1522,
Equus caballus ENSECAG00000005805 possible_ortholog 1 retrogene
retro_ecab_97,
Homo sapiens ENSG00000100811 possible_ortholog 2 retrogenes
retro_hsap_106, retro_hsap_97,
Gorilla gorilla ENSGGOG00000026332 possible_ortholog 2 retrogenes
retro_ggor_190, retro_ggor_2,
Mustela putorius furo ENSMPUG00000002931 ortholog_one2one 1 retrogene
retro_mputfur_867,
Mus musculus ENSMUSG00000021264 ortholog_one2one 1 retrogene
retro_mmus_190,
Oryctolagus cuniculus ENSOCUG00000026938 ortholog_one2one 1 retrogene
retro_ocun_1871,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_91 61.29 54.07
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000020819 retrocopies