Parental gene:

PFN1, ENSGGOG00000022394

Aliases:None
Description:Profilin [Source:UniProtKB/TrEMBL;Acc:G3S0W1]
Organism:Gorilla (Gorilla gorilla)
Coordinates:17:5054031..5057380(-)


>ENSGGOG00000022394
TCGAGCCCAGTCCGCGGCCCCAGCAGCAGCGCCGAGAGCAGCCCCAGTAGCAGCGCCATGGCCGGGTGGAACGCCTACAT
CGACAACCTCATGGCGGACGGGACCTGTCAGGACGCGGCCATCGTGGGCTACAAGGACTCGCCCTCCGTCTGGGCCGCCG
TCCCCGGGAAAACCTTCGTCAACATCACGCCAGCTGAGGTGGGTGTCCTGGTTGGCAAAGACCGGTCAAGTTTTTACGTG
AATGGGCTGACACTTGGGGGCCAGAAATGTTCGGTGATCCGGGACTCACTGCTGCAGGATGGGGAATTTAGCATGGATCT
TCGTACCAAGAGCACCGGTGGGGCCCCCACCTTCAATGTCACTGTCACCAAGACTGACAAGACGCTAGTCCTGCTGATGG
GCAAAGAAGGTGTCCACGGTGGTTTGATCAACAAGAAATGTTATGAAATGGCCTCCCACCTTCGGCGTTCCCAGTACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 105 .31 RPM
SRP007412_cerebellum 85 .26 RPM
SRP007412_heart 120 .73 RPM
SRP007412_kidney 243 .33 RPM
SRP007412_liver 266 .52 RPM
SRP007412_testis 92 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006193 possible_ortholog 2 retrogenes
retro_amel_1712, retro_amel_1781,
Bos taurus ENSBTAG00000004915 ortholog_one2many 1 retrogene
retro_btau_141,
Callithrix jacchus ENSCJAG00000011719 ortholog_one2one 2 retrogenes
retro_cjac_1023, retro_cjac_1641,
Cavia porcellus ENSCPOG00000013136 ortholog_one2one 1 retrogene
retro_cpor_1216,
Equus caballus ENSECAG00000021116 ortholog_one2many 3 retrogenes
retro_ecab_171, retro_ecab_28, retro_ecab_559,
Homo sapiens ENSG00000108518 ortholog_one2one 10 retrogenes
retro_hsap_214, retro_hsap_215, retro_hsap_221, retro_hsap_223, retro_hsap_224, retro_hsap_352, retro_hsap_446, retro_hsap_447, retro_hsap_450, retro_hsap_451,
Macaca mulatta ENSMMUG00000002772 ortholog_one2one 5 retrogenes
retro_mmul_407, retro_mmul_527, retro_mmul_528, retro_mmul_574, retro_mmul_732,
Mus musculus ENSMUSG00000018293 ortholog_one2one 1 retrogene
retro_mmus_1326,
Nomascus leucogenys ENSNLEG00000017446 ortholog_one2many 6 retrogenes
retro_nleu_16, retro_nleu_1870, retro_nleu_2425, retro_nleu_2429, retro_nleu_848, retro_nleu_886,
Otolemur garnettii ENSOGAG00000031395 ortholog_one2one 3 retrogenes
retro_ogar_1680, retro_ogar_2143, retro_ogar_3351,
Procavia capensis ENSPCAG00000000291 ortholog_one2one 1 retrogene
retro_pcap_27,
Pelodiscus sinensis ENSPSIG00000004124 ortholog_one2one 1 retrogene
retro_psin_8,
Pan troglodytes ENSPTRG00000008616 ortholog_one2one 5 retrogenes
retro_ptro_185, retro_ptro_196, retro_ptro_276, retro_ptro_332, retro_ptro_333,
Rattus norvegicus ENSRNOG00000003975 ortholog_one2many 1 retrogene
retro_rnor_1623,
Sus scrofa ENSSSCG00000017905 ortholog_one2one 1 retrogene
retro_sscr_275,
Ictidomys tridecemlineatus ENSSTOG00000028950 ortholog_one2one 1 retrogene
retro_itri_129,
Tursiops truncatus ENSTTRG00000001299 ortholog_one2many 1 retrogene
retro_ttru_14,
Vicugna pacos ENSVPAG00000005327 ortholog_one2one 3 retrogenes
retro_vpac_389, retro_vpac_395, retro_vpac_457,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_285 72.14 86.79
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ggor_289 64.49 84.91
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_ggor_366 72.61 96.86
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000022394 retrocopies