Parental gene:

C9ORF78, ENSGGOG00000013358

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:9:113406313..113414164(-)


>ENSGGOG00000013358
ATGCCGGTCGTCCGGAAGATTTTCCGTCGCCGCCGGGGCGACTCGGAGTCAGAGGAAGATGAGCAGGACTCAGAGGAGGT
TCGATTAAAACTGGAAGAGACCAGAGAGGTACAGAACTTGAGGAAGAGGCCCAACGGGGTGAGTGCTGTGGCCTTGCTGG
TGGGAGAGAAGGTACAAGAGGAGACCACTCTAGTGGATGATCCCTTTCAGATGAAGACAGGTGGTATGGTGGATATGAAG
AAACTGAAGGAAAGGGGCAAAGATAAGATCAGTGAGGAGGAGGACCTGCACCTGGGGACGTCGTTTTCTGCAGAAACCAA
CCGAAGGGATGAGGATGCAGACATGATGAAGTACATTGAGACAGAGCTAAAGAAGAGGAAAGGGATCGTGGAACATGAGG
AACAGAAAGTTAAGCCAAAGAATGCAGAGGACTGTCTTTATGAACTTCCAGAAAACATCCGTGTTTCCTCAGCAAAGAAG
ACCGAGGAGATGCTTTCCAACCAGATGCTGAGTGGCATTCCTGAGGTGGACCTGGGCATCGATGCTAAAATAAAAAATAT
CATTTCCACGGAGGATGCCAAGGCCCGTCTGCTGGCAGAGCAGCAGAACAAGAAGAAAGACAGCGAGACCTCCTTCGTGC
CTACCAACATGGCTGTGAATTACGTGCAGCACAACAGATTTTATCATGAGGAGCTCAACGCGCCCATACGGAGAAACAAA
GAAGAGCCCAAGGCCCGGCCCTTGAGAGTAGGCGACACGGAGAAGCCAGAGCCTGAGCGGTCCCCTCCTAACCGCAAGCG
TCCTGCTAACGAGAAGGCAACTGATGACTATCATTATGAGAAGTTCAAGAAAATGAATAGGCGGTACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 68 .81 RPM
SRP007412_cerebellum 57 .13 RPM
SRP007412_heart 19 .61 RPM
SRP007412_kidney 78 .26 RPM
SRP007412_liver 33 .18 RPM
SRP007412_testis 71 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020307 possible_ortholog 1 retrogene
retro_btau_1138,
Canis familiaris ENSCAFG00000019979 possible_ortholog 1 retrogene
retro_cfam_116,
Choloepus hoffmanni ENSCHOG00000013895 ortholog_one2many 3 retrogenes
retro_chof_1103, retro_chof_1747, retro_chof_978,
Callithrix jacchus ENSCJAG00000020318 ortholog_one2one 3 retrogenes
retro_cjac_1757, retro_cjac_2299, retro_cjac_2778,
Cavia porcellus ENSCPOG00000009285 possible_ortholog 1 retrogene
retro_cpor_712,
Dasypus novemcinctus ENSDNOG00000019214 ortholog_one2one 1 retrogene
retro_dnov_1540,
Equus caballus ENSECAG00000018958 possible_ortholog 1 retrogene
retro_ecab_174,
Homo sapiens ENSG00000136819 ortholog_one2one 3 retrogenes
retro_hsap_2872, retro_hsap_2913, retro_hsap_320,
Macropus eugenii ENSMEUG00000010524 ortholog_many2many 3 retrogenes
retro_meug_1046, retro_meug_1241, retro_meug_508,
Microcebus murinus ENSMICG00000009596 possible_ortholog 1 retrogene
retro_mmur_1466,
Macaca mulatta ENSMMUG00000003795 ortholog_one2one 2 retrogenes
retro_mmul_1460, retro_mmul_1870,
Monodelphis domestica ENSMODG00000006832 ortholog_one2many 1 retrogene
retro_mdom_518,
Mus musculus ENSMUSG00000026851 possible_ortholog 1 retrogene
retro_mmus_2978,
Nomascus leucogenys ENSNLEG00000017658 ortholog_one2one 3 retrogenes
retro_nleu_1763, retro_nleu_614, retro_nleu_823,
Otolemur garnettii ENSOGAG00000009770 ortholog_one2one 1 retrogene
retro_ogar_1015,
Pongo abelii ENSPPYG00000019685 ortholog_one2one 1 retrogene
retro_pabe_2426,
Pan troglodytes ENSPTRG00000021465 ortholog_one2one 3 retrogenes
retro_ptro_1943, retro_ptro_1969, retro_ptro_258,
Sarcophilus harrisii ENSSHAG00000012313 ortholog_one2many 1 retrogene
retro_shar_746,
Ictidomys tridecemlineatus ENSSTOG00000020630 possible_ortholog 1 retrogene
retro_itri_1783,
Tupaia belangeri ENSTBEG00000013115 possible_ortholog 1 retrogene
retro_tbel_514,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1990 67.72 53.63
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Download FASTA sequences of all ENSGGOG00000013358 retrocopies