Parental gene: | FAM136A, ENSDNOG00000019447 |
| Aliases: | None |
| Description: | family with sequence similarity 136, member A [Source:HGNC Symbol;Acc:25911] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_7965:22868..26034(-) |
>ENSDNOG00000019447
ATGGCGGAGCTGCAGCAGCTCCGCGTGCAGGAGGCGGTGGACACCATGGTGAAGAGCCTGGAGCGGGAGAACATCCGGAA
GATGCAGGGAATCATGTTCCGGTGCAGCGCCGGCTGTTGTGAGGACAGCCAGGCGTCCATGCAGCAGGTCCATCAGTGCA
TTGAGCGCTGCCATGTACCTCTGGCTCAAGCCCAGGCCCTGGTGACCAGCGAGCTGGAGAAGTTCCAGGACCGCCTGGCC
CGGTGCACCATGCATTGCAATGACAAAGCCAAAGACTCGATAGATGCAGGGACTAAGGAGCTTCAGGTGAAGCGGCAGCT
GGAGAGCTGTGTGACCAAGTGTGTGGATGACCACATGCACCTCATCCCCTCCATGACCAAGAAGATGAAGGAGTCTCTCT
CATCCATGGCGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 15 .56 RPM |
| SRP012922_cerebellum | 3 .02 RPM |
| SRP012922_heart | 5 .80 RPM |
| SRP012922_kidney | 6 .57 RPM |
| SRP012922_liver | 4 .64 RPM |
| SRP012922_lung | 4 .43 RPM |
| SRP012922_quadricep_muscle | 9 .17 RPM |
| SRP012922_spleen | 4 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000015992 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000008674 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000003353 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000009117 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000006529 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000008119 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000035141 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023247 | ortholog_one2many | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000002304 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000015791 | ortholog_one2one | 8 retrogenes | |
| Macaca mulatta | ENSMMUG00000007962 | ortholog_one2many | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000011533 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000057497 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000028265 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000012323 | ortholog_one2one | 6 retrogenes | |
| Pan troglodytes | ENSPTRG00000012030 | ortholog_one2one | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016273 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000026446 | ortholog_one2one | 6 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000008343 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017418 | ortholog_one2many | 8 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001198 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_324 | 78.01 | 100.00 | Please wait, loading  |
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| 2. | retro_dnov_620 | 64.62 | 92.03 | Please wait, loading |
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| 3. | retro_dnov_873 | 74.14 | 83.33 | Please wait, loading |
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| 4. | retro_dnov_901 | 74.10 | 100.00 | Please wait, loading |
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| 5. | retro_dnov_2036 | 80.74 | 96.38 | Please wait, loading |
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| 6. | retro_dnov_2465 | 79.57 | 67.39 | Please wait, loading |
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| 7. | retro_dnov_2612 | 71.43 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000019447 retrocopies