Parental gene:

ENSDNOG00000014823

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4257:126286..132187(+)


>ENSDNOG00000014823
ATGAGTGCGGCGGCTTCGGGAGGAGGCCGCCGTCGCCGTGCGCGAGTGTCCCGCCTCGTCTCCTTCAGCGCGAGCCACCG
GCTCCACAGCAAATCTCTGAGCAATGAAGAAAACTTGAAACTCTTTGGGAAATGCAACAATCCAAATGGCCATGGGCACA
ATTATAAAGTTATGGTGACAGTACATGGAGAGATTGATCCTGTTACAAGGATGGTTATGAACTTGACCGACCTCAAGGAG
TATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAC
TACAGAAAATGTAGCTGTGTATATATGGGAAAACCTTCAGAAATTTCTTCCTGCGGGAGTTCTTTATAAAGTAAAAGTAT
ATGAAACTGACAATAATATTGTAGTCTATAAAGGAGAATAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 20 .61 RPM
SRP012922_cerebellum 8 .39 RPM
SRP012922_heart 9 .98 RPM
SRP012922_kidney 19 .17 RPM
SRP012922_liver 15 .95 RPM
SRP012922_lung 21 .08 RPM
SRP012922_quadricep_muscle 13 .85 RPM
SRP012922_spleen 27 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003968 ortholog_one2one 3 retrogenes
retro_amel_1001, retro_amel_1480, retro_amel_691,
Bos taurus ENSBTAG00000003770 ortholog_one2one 3 retrogenes
retro_btau_1182, retro_btau_1762, retro_btau_682,
Canis familiaris ENSCAFG00000013915 ortholog_one2one 2 retrogenes
retro_cfam_1386, retro_cfam_1859,
Choloepus hoffmanni ENSCHOG00000000013 possible_ortholog 2 retrogenes
retro_chof_1925, retro_chof_2556,
Callithrix jacchus ENSCJAG00000012437 possible_ortholog 2 retrogenes
retro_cjac_2534, retro_cjac_2853,
Echinops telfairi ENSETEG00000008145 ortholog_one2many 2 retrogenes
retro_etel_1924, retro_etel_2039,
Felis catus ENSFCAG00000024702 ortholog_one2one 3 retrogenes
retro_fcat_1546, retro_fcat_212, retro_fcat_564,
Homo sapiens ENSG00000150787 possible_ortholog 1 retrogene
retro_hsap_3408,
Myotis lucifugus ENSMLUG00000023388 ortholog_one2one 1 retrogene
retro_mluc_946,
Macaca mulatta ENSMMUG00000015255 possible_ortholog 1 retrogene
retro_mmul_995,
Nomascus leucogenys ENSNLEG00000007299 possible_ortholog 1 retrogene
retro_nleu_1856,
Otolemur garnettii ENSOGAG00000017191 possible_ortholog 3 retrogenes
retro_ogar_1718, retro_ogar_2790, retro_ogar_609,
Pongo abelii ENSPPYG00000003880 possible_ortholog 1 retrogene
retro_pabe_432,
Pan troglodytes ENSPTRG00000004288 possible_ortholog 3 retrogenes
retro_ptro_2315, retro_ptro_2979, retro_ptro_337,
Sorex araneus ENSSARG00000001975 ortholog_one2one 2 retrogenes
retro_sara_163, retro_sara_72,
Sus scrofa ENSSSCG00000015040 ortholog_one2one 1 retrogene
retro_sscr_284,
Ictidomys tridecemlineatus ENSSTOG00000013277 possible_ortholog 1 retrogene
retro_itri_1096,
Tursiops truncatus ENSTTRG00000010526 ortholog_one2one 1 retrogene
retro_ttru_1710,
Vicugna pacos ENSVPAG00000000061 ortholog_one2one 1 retrogene
retro_vpac_363,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1747 78.67 50.68
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Download FASTA sequences of all ENSDNOG00000014823 retrocopies