Parental gene:

PTS, ENSCJAG00000012437

Aliases:None
Description:6-pyruvoyltetrahydropterin synthase [Source:HGNC Symbol;Acc:9689]
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:9727418..9735439(+)


>ENSCJAG00000012437
ATGAGCGCGGTGGGTGGCGGCCGTCGTCCCAAGGCGCAGGTGTCCCGCGGCATCTCCTTCAGCGCGAGCCACCGGCTGCA
CAGTAAGTTTCTAAGTGAGGAAGAAAACTTGAAGCTGTTTGGGAAATGCAGCAATCCAAATGGCCATGGGCACAATTATA
AAGTTGTGGTGACAGTACATGGACAGATTGACCCTGCTACGGGAATGGTTATGAATTTGACTGATCTCAAGAAACATATG
GAGGAGGCAATTATGCAGCCCCTTGATCATAAGAACCTGGATCTGGATGTGCCGTACTTTGCAGATGTGGTGAGCACGAC
TGAAAATGTAGCTGTTTATATCTGGGACAACCTCCAGAAAGTTCTTCCTGTAGGAGTTCTTTATAAAGTAAAAGTGTATG
AAACTGACAATAATATTGTCGTTTATAAAGGAGAATAG

Library Parental gene expression (RPM)
SRP051959_colon 1 .46 RPM
SRP051959_heart 2 .86 RPM
SRP051959_kidney 8 .54 RPM
SRP051959_liver 11 .42 RPM
SRP051959_lung 2 .28 RPM
SRP051959_lymph_node 1 .55 RPM
SRP051959_skeletal_muscle 1 .75 RPM
SRP051959_spleen 2 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000013 possible_ortholog 2 retrogenes
retro_chof_1925, retro_chof_2556,
Dasypus novemcinctus ENSDNOG00000014823 possible_ortholog 1 retrogene
retro_dnov_1747,
Echinops telfairi ENSETEG00000008145 possible_ortholog 2 retrogenes
retro_etel_1924, retro_etel_2039,
Homo sapiens ENSG00000150787 ortholog_one2one 1 retrogene
retro_hsap_3408,
Macaca mulatta ENSMMUG00000015255 ortholog_one2one 1 retrogene
retro_mmul_995,
Nomascus leucogenys ENSNLEG00000007299 ortholog_one2one 1 retrogene
retro_nleu_1856,
Otolemur garnettii ENSOGAG00000017191 ortholog_one2one 3 retrogenes
retro_ogar_1718, retro_ogar_2790, retro_ogar_609,
Pongo abelii ENSPPYG00000003880 ortholog_one2one 1 retrogene
retro_pabe_432,
Pan troglodytes ENSPTRG00000004288 ortholog_one2one 3 retrogenes
retro_ptro_2315, retro_ptro_2979, retro_ptro_337,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2534 87.62 71.72
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2. retro_cjac_2853 77.52 88.28
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Download FASTA sequences of all ENSCJAG00000012437 retrocopies