Parental gene: | PTS, ENSBTAG00000003770 |
| Aliases: | None |
| Description: | 6-pyruvoyl tetrahydrobiopterin synthase [Source:RefSeq peptide;Acc:NP_001107009] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 15:22912246..22920397(+) |
>ENSBTAG00000003770
ATGAACGGGGCAGGGTCGGGCCCTCGCCGGCGGGCGCGAGTGTCCCGCCTCGTCTCCTTCAGCGCGACCCACCGCCTCCA
CAGCAAATCTCTTAGTAATGAAGAAAACTTGAAATTATTTGGGAAGTGCAACAACCCAAATGGCCATGGGCACAATTACA
AAGTTGTGGTGACAGTACATGGAGAGGTTGATCCTGTTACAGGAATGGTCATGAATTTGACTGACCTCAAAAAGTATATG
GAGGAGGCAATTATGAAGCCCCTTGATCATAAGAATCTGGATCTAGATGTGCCATATTTTGCAGACATTGTAAGCACAAC
AGAAAATGTAGCCGTATATATCTGGGAAAACCTCCAGAAATTTCTTCCTGTGGGAGTTCTTTATAAAGTAAAAGTATATG
AAACTGACAATAATATTGTAGTCTATAAAGGAGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 13 .34 RPM |
| ERP005899_muscle | 6 .55 RPM |
| SRP017611_brain | 11 .33 RPM |
| SRP017611_kidney | 8 .48 RPM |
| SRP017611_liver | 6 .19 RPM |
| SRP030211_testis | 13 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003968 | ortholog_one2one | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000013915 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000014823 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008145 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000024702 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000023388 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000015255 | possible_ortholog | 1 retrogene | |
| Sorex araneus | ENSSARG00000001975 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000015040 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010526 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000000061 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_682 | 98.29 | 80.69 | Please wait, loading  |
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| 2. | retro_btau_1182 | 94.48 | 100.00 | Please wait, loading |
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| 3. | retro_btau_1762 | 85.62 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSBTAG00000003770 retrocopies