Parental gene:

MAGOHB, ENSSSCG00000000635

Aliases:None
Description:mago-nashi homolog B (Drosophila) [Source:HGNC Symbol;Acc:25504]
Organism:Pig (Sus scrofa)
Coordinates:5:64143662..64158555(+)


>ENSSSCG00000000635
ATGTCTATGGCCAGCGATTTCTACCTGCGCTACTACGTAGGACACAAGGGCAAGTTTGGACACGAGTTTCTGGAGTTCGA
GTTTCGGCCGGACGGAAAACTTAGATACGCCAACAACAGCAATTATAAAAATGATGTCATGATCAGAAAGGAGGCTTATG
TACACAAGAGTGTAATGGAAGAACTGAAGAGAATTATTGACGACAGTGAAATTACAAAGGAAGATGATGCTTTGTGGCCT
CCTCCTGACAGGGTTGGTCGGCAGGAGCTTGAAATCGTGATTGGAGATGAACACATTTCTTTCACCACATCAAAAATAGG
TTCTCTTATTGATGTTAATCAGTCAAAGGATCCTGAAGGCCTTCGAGTATTTTATTACTTGGTACAGGACCTGAAATGTT
TAGTTTTTAGTCTTATTGGATTACATTTCAAGATTAAACCAATCTAA

Library Parental gene expression (RPM)
SRP014902_placenta 2 .79 RPM
SRP014902_testis 11 .88 RPM
SRP018856_adipose 11 .28 RPM
SRP018288_kidney 8 .67 RPM
SRP018288_lung 8 .55 RPM
SRP018288_liver 8 .95 RPM
SRP018288_heart 4 .66 RPM
SRP035408_liver 9 .28 RPM
SRP035408_brain 9 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019235 ortholog_one2one 1 retrogene
retro_btau_399,
Choloepus hoffmanni ENSCHOG00000004382 ortholog_one2one 1 retrogene
retro_chof_1730,
Dasypus novemcinctus ENSDNOG00000005997 ortholog_one2one 4 retrogenes
retro_dnov_140, retro_dnov_347, retro_dnov_423, retro_dnov_891,
Echinops telfairi ENSETEG00000016591 ortholog_one2one 3 retrogenes
retro_etel_1022, retro_etel_1566, retro_etel_2147,
Macropus eugenii ENSMEUG00000001782 ortholog_one2one 1 retrogene
retro_meug_324,
Myotis lucifugus ENSMLUG00000003527 ortholog_one2one 2 retrogenes
retro_mluc_1039, retro_mluc_2484,
Macaca mulatta ENSMMUG00000005082 possible_ortholog 1 retrogene
retro_mmul_1246,
Monodelphis domestica ENSMODG00000000462 ortholog_one2one 1 retrogene
retro_mdom_424,
Ochotona princeps ENSOPRG00000000548 ortholog_one2one 2 retrogenes
retro_opri_1171, retro_opri_308,
Sus scrofa ENSSSCG00000003849 within_species_paralog 3 retrogenes
retro_sscr_1007, retro_sscr_706, retro_sscr_977,
Tursiops truncatus ENSTTRG00000001272 ortholog_one2one 2 retrogenes
retro_ttru_515, retro_ttru_647,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_971 95.30 100.00
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Download FASTA sequences of all ENSSSCG00000000635 retrocopies