Parental gene: | MAGOH, ENSSSCG00000003849 |
| Aliases: | None |
| Description: | mago-nashi homolog, proliferation-associated (Drosophila) [Source:HGNC Symbol;Acc:6815] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 6:146652499..146663692(+) |
>ENSSSCG00000003849
ATGGAAAGTGACTTCTATCTGCGTTACTACGTGGGTCACAAGGGCAAATTCGGCCACGAATTCCTGGAGTTTGAGTTTCG
ACCCGACGGGAAATTGAGATATGCCAACAACAGCAATTACAAAAATGATGTCATGATCAGAAAAGAGGCTTATGTACATA
AAAGTGTGATGGAGGAACTAAAGAGGATAATTGATGACAGTGAAATTACCAAAGAGGATGATGCTTTGTGGCCTCCTCCT
GACCGAGTAGGTCGGCAGGAGCTTGAAATTGTCATTGGGGATGAACACATTTCCTTCACAACATCAAAAATTGGTTCACT
GATTGATGTCAATCAATCTAAGGATCCAGAAGGCTTACGAGTATTTTATTATCTTGTCCAGGACCTGAAATGTTTGGTCT
TCAGTCTTATCGGATTACACTTCAAGATTAAACCAATCTAG
ATGGAAAGTGACTTCTATCTGCGTTACTACGTGGGTCACAAGGGCAAATTCGGCCACGAATTCCTGGAGTTTGAGTTTCG
ACCCGACGGGAAATTGAGATATGCCAACAACAGCAATTACAAAAATGATGTCATGATCAGAAAAGAGGCTTATGTACATA
AAAGTGTGATGGAGGAACTAAAGAGGATAATTGATGACAGTGAAATTACCAAAGAGGATGATGCTTTGTGGCCTCCTCCT
GACCGAGTAGGTCGGCAGGAGCTTGAAATTGTCATTGGGGATGAACACATTTCCTTCACAACATCAAAAATTGGTTCACT
GATTGATGTCAATCAATCTAAGGATCCAGAAGGCTTACGAGTATTTTATTATCTTGTCCAGGACCTGAAATGTTTGGTCT
TCAGTCTTATCGGATTACACTTCAAGATTAAACCAATCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 13 .01 RPM |
| SRP014902_testis | 17 .82 RPM |
| SRP018856_adipose | 18 .17 RPM |
| SRP018288_kidney | 20 .98 RPM |
| SRP018288_lung | 42 .87 RPM |
| SRP018288_liver | 9 .91 RPM |
| SRP018288_heart | 13 .62 RPM |
| SRP035408_liver | 32 .09 RPM |
| SRP035408_brain | 28 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009587 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000015908 | ortholog_one2one | 6 retrogenes | |
| Felis catus | ENSFCAG00000025232 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000012778 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000012081 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000000635 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_706 | 71.94 | 95.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sscr_977 | 76.87 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_sscr_1007 | 76.87 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000003849 retrocopies