Parental gene: | TMA7, ENSPTRG00000041769 |
| Aliases: | TMA7, CCDC72 |
| Description: | translation machinery associated 7 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26932] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 3:49187596..49191543(+) |
>ENSPTRG00000041769
ATGTCTGGCCGCGAAGGTGGCAAGAAGAAGCCACTGAAACAGCCCAAGAAGCAGGCCAAGGAGATGGACGAGGAAGATAA
GGCTTTCAAGCAGAAACAAAAAGAGGAGCAGAAGAAACTCGAGGAGCTAAAAGCGAAGGCCGCGGGGAAGGGGCCCTTGG
CCACAGGTGGAATTAAGAAATCTGGCAAAAAGTAA
ATGTCTGGCCGCGAAGGTGGCAAGAAGAAGCCACTGAAACAGCCCAAGAAGCAGGCCAAGGAGATGGACGAGGAAGATAA
GGCTTTCAAGCAGAAACAAAAAGAGGAGCAGAAGAAACTCGAGGAGCTAAAAGCGAAGGCCGCGGGGAAGGGGCCCTTGG
CCACAGGTGGAATTAAGAAATCTGGCAAAAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 72 .95 RPM |
| SRP007412_cerebellum | 57 .07 RPM |
| SRP007412_heart | 41 .68 RPM |
| SRP007412_kidney | 68 .39 RPM |
| SRP007412_liver | 41 .47 RPM |
| SRP007412_testis | 78 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001193 | ortholog_one2one | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000002871 | ortholog_one2one | 18 retrogenes |
retro_cjac_1370, retro_cjac_1449, retro_cjac_1504, retro_cjac_1667, retro_cjac_1670, retro_cjac_1704, retro_cjac_1918, retro_cjac_2092, retro_cjac_2258, retro_cjac_2422, retro_cjac_2629, retro_cjac_2673, retro_cjac_2692, retro_cjac_2799, retro_cjac_3651, retro_cjac_536, retro_cjac_81, retro_cjac_849,
|
| Felis catus | ENSFCAG00000026902 | ortholog_one2many | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028044 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000091537 | ortholog_one2one | 11 retrogenes | |
| Rattus norvegicus | ENSRNOG00000042689 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000047225 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000011351 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_136 | 98.44 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_150 | 90.62 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1492 | 89.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_1638 | 68.75 | 98.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_1953 | 84.38 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_1976 | 89.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ptro_2312 | 92.19 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ptro_2535 | 84.38 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ptro_2691 | 76.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000041769 retrocopies