Parental gene:

TMA7, ENSAMEG00000001193

Aliases:None
Description:translation machinery associated 7 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26932]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193373.1:374539..376478(-)


>ENSAMEG00000001193
GGTGGCAAGAAGAAGCCCCTGAAGCAGCCCAAGAAGCAGGCCAAGGAGATGGACGAGGAAGATAAGGCATTCAAGCAGAA
ACAGAAAGAGGAGCAGAAGAAACTCGAGGAGCTAAAAGCGAAGGCCGCGGGGAAGGGCCCCCTGGCCACAGGTGGAATTA
AGAAATCTGGCAAAAAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002871 ortholog_one2one 18 retrogenes
retro_cjac_1370, retro_cjac_1449, retro_cjac_1504, retro_cjac_1667, retro_cjac_1670, retro_cjac_1704, retro_cjac_1918, retro_cjac_2092, retro_cjac_2258, retro_cjac_2422, retro_cjac_2629, retro_cjac_2673, retro_cjac_2692, retro_cjac_2799, retro_cjac_3651, retro_cjac_536, retro_cjac_81, retro_cjac_849,
Felis catus ENSFCAG00000026902 ortholog_one2many 5 retrogenes
retro_fcat_138, retro_fcat_1630, retro_fcat_173, retro_fcat_57, retro_fcat_630,
Homo sapiens ENSG00000232112 ortholog_one2one 11 retrogenes
retro_hsap_131, retro_hsap_154, retro_hsap_2151, retro_hsap_2561, retro_hsap_2888, retro_hsap_2934, retro_hsap_3115, retro_hsap_3402, retro_hsap_3736, retro_hsap_3852, retro_hsap_3964,
Gorilla gorilla ENSGGOG00000028044 ortholog_one2many 3 retrogenes
retro_ggor_11, retro_ggor_2002, retro_ggor_209,
Mus musculus ENSMUSG00000091537 ortholog_one2one 11 retrogenes
retro_mmus_1216, retro_mmus_1582, retro_mmus_1632, retro_mmus_2117, retro_mmus_2189, retro_mmus_2222, retro_mmus_2545, retro_mmus_2975, retro_mmus_3235, retro_mmus_389, retro_mmus_412,
Pan troglodytes ENSPTRG00000041769 ortholog_one2one 9 retrogenes
retro_ptro_136, retro_ptro_1492, retro_ptro_150, retro_ptro_1638, retro_ptro_1953, retro_ptro_1976, retro_ptro_2312, retro_ptro_2535, retro_ptro_2691,
Rattus norvegicus ENSRNOG00000042689 ortholog_one2many 2 retrogenes
retro_rnor_316, retro_rnor_894,
Rattus norvegicus ENSRNOG00000047225 ortholog_one2many 1 retrogene
retro_rnor_1709,
Sus scrofa ENSSSCG00000011351 ortholog_one2one 6 retrogenes
retro_sscr_133, retro_sscr_19, retro_sscr_299, retro_sscr_541, retro_sscr_735, retro_sscr_910,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_270 66.10 96.61
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2. retro_amel_503 75.44 94.92
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3. retro_amel_826 71.19 98.31
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4. retro_amel_879 76.27 98.31
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5. retro_amel_1070 67.27 93.22
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6. retro_amel_1643 73.68 88.14
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Download FASTA sequences of all ENSAMEG00000001193 retrocopies