Parental gene: | TMA7, ENSCJAG00000002871 |
| Aliases: | None |
| Description: | translation machinery associated 7 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26932] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 15:24114582..24118456(+) |
>ENSCJAG00000002871
ATGTCCGGCCGGGAAGGTGGCAAGAAGAAGCCCCTGAAACAGCCCAAGAAGCAGGCCAAGGAAATGGACGAGGAAGATAA
GGCTTTCAAGCAGAAACAAAAAGAAGAGCAGAAGAAACTCGAAGAGCTAAAAGCAAAGGCCGCGGGGAAGGGGCCCCTGG
CCACAGGTGGAATTAAGAAATCTGGCAAAAAGTAA
ATGTCCGGCCGGGAAGGTGGCAAGAAGAAGCCCCTGAAACAGCCCAAGAAGCAGGCCAAGGAAATGGACGAGGAAGATAA
GGCTTTCAAGCAGAAACAAAAAGAAGAGCAGAAGAAACTCGAAGAGCTAAAAGCAAAGGCCGCGGGGAAGGGGCCCCTGG
CCACAGGTGGAATTAAGAAATCTGGCAAAAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 13 .82 RPM |
| SRP051959_skeletal_muscle | 15 .53 RPM |
| SRP051959_lymph_node | 13 .68 RPM |
| SRP051959_lung | 13 .13 RPM |
| SRP051959_liver | 11 .61 RPM |
| SRP051959_kidney | 14 .89 RPM |
| SRP051959_heart | 11 .17 RPM |
| SRP051959_colon | 11 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001193 | ortholog_one2one | 6 retrogenes | |
| Felis catus | ENSFCAG00000026902 | ortholog_one2many | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028044 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000091537 | ortholog_one2one | 11 retrogenes | |
| Pan troglodytes | ENSPTRG00000041769 | ortholog_one2one | 9 retrogenes | |
| Rattus norvegicus | ENSRNOG00000042689 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000047225 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000011351 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_81 | 89.06 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_536 | 73.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_849 | 87.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_1370 | 66.10 | 90.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_1449 | 73.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cjac_1504 | 93.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_cjac_1667 | 95.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_cjac_1670 | 77.27 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_cjac_1704 | 86.15 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_cjac_1918 | 70.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_cjac_2092 | 75.41 | 93.75 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_cjac_2258 | 81.25 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_cjac_2422 | 69.84 | 96.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_cjac_2629 | 85.25 | 95.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_cjac_2673 | 74.24 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_cjac_2692 | 89.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_cjac_2799 | 66.15 | 98.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_cjac_3651 | 87.69 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000002871 retrocopies