Parental gene: | C8orf59, ENSPTRG00000020385 |
| Aliases: | None |
| Description: | chromosome 8 open reading frame 59 [Source:HGNC Symbol;Acc:32235] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 8:83338456..83344880(-) |
>ENSPTRG00000020385
ATGGCCAAGAACAAATTAAGAGGGCCGAAGTCCAGGAATGTATTTCACATAGCCAGCCAAAAAAACTTTAAGGCTAAAAA
CAAAGCAAAACCAGTTACCACTAATCTTAAGAAGATAAACATTATGAATGAGGAAAAAGTTAACAGAGTAAATAAAGCTT
TTGTAAATGTACAAAAGGAACTTGCACATTTCGCAAAAAGCATTTCACTTGAACCTCTGCAGAAAGAACTGATTCCTCAG
CAGCGTCATGAAAGCAAACCAGTTAATGTTGATGAAGCTACAAGATTAATGGCTCTGTTGTAA
ATGGCCAAGAACAAATTAAGAGGGCCGAAGTCCAGGAATGTATTTCACATAGCCAGCCAAAAAAACTTTAAGGCTAAAAA
CAAAGCAAAACCAGTTACCACTAATCTTAAGAAGATAAACATTATGAATGAGGAAAAAGTTAACAGAGTAAATAAAGCTT
TTGTAAATGTACAAAAGGAACTTGCACATTTCGCAAAAAGCATTTCACTTGAACCTCTGCAGAAAGAACTGATTCCTCAG
CAGCGTCATGAAAGCAAACCAGTTAATGTTGATGAAGCTACAAGATTAATGGCTCTGTTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 9 .31 RPM |
| SRP007412_cerebellum | 4 .80 RPM |
| SRP007412_heart | 11 .92 RPM |
| SRP007412_kidney | 14 .46 RPM |
| SRP007412_liver | 9 .20 RPM |
| SRP007412_testis | 8 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002409 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000032227 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000000379 | ortholog_one2one | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000021965 | ortholog_one2one | 5 retrogenes | |
| Felis catus | ENSFCAG00000026366 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000176731 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027464 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000032612 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006155 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006381 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000078784 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000029910 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000038902 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000006144 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_471 | 64.00 | 99.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1759 | 67.86 | 83.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2275 | 73.91 | 89.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2437 | 67.96 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2982 | 67.71 | 93.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000020385 retrocopies