Parental gene: | ENSCPOG00000021965 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_0:28899470..28903650(+) |
>ENSCPOG00000021965
ATGGCCAAGAATAAATTAAGAGGGCAGAAGTCCAAGAATGTATTTCAGATAGCCAACCAAAAAACCTTTAAGTCTAAAAA
TAAAGCAAAACCAGTTACCACTAATCTTAAGAAGATAAACATTGTGAATGATGAAAAGATTCGCAGAATGAATAATGCTT
TTGTAAACATTCAGAAGGAACTTGCACACTTCTCAAAAAAGCTTACTCTTGAACCTCGGCACAAAGTGCGGGTTAATCGG
CAGCATCCTGAAAATGAACCAGTTAATGTTGATGAAGCTGCAAGATTAATGGCTCAATTGTAA
ATGGCCAAGAATAAATTAAGAGGGCAGAAGTCCAAGAATGTATTTCAGATAGCCAACCAAAAAACCTTTAAGTCTAAAAA
TAAAGCAAAACCAGTTACCACTAATCTTAAGAAGATAAACATTGTGAATGATGAAAAGATTCGCAGAATGAATAATGCTT
TTGTAAACATTCAGAAGGAACTTGCACACTTCTCAAAAAAGCTTACTCTTGAACCTCGGCACAAAGTGCGGGTTAATCGG
CAGCATCCTGAAAATGAACCAGTTAATGTTGATGAAGCTGCAAGATTAATGGCTCAATTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 13 .23 RPM |
| SRP017611_kidney | 14 .66 RPM |
| SRP017611_brain | 5 .58 RPM |
| SRP040447_lung | 8 .75 RPM |
| SRP040447_skeletal_muscle | 5 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002409 | ortholog_one2one | 2 retrogenes | |
| Bos taurus | ENSBTAG00000032227 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000000379 | ortholog_one2one | 5 retrogenes | |
| Felis catus | ENSFCAG00000026366 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000176731 | ortholog_one2many | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027464 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000032612 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006155 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006381 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000078784 | ortholog_one2many | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000029910 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000020385 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000038902 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000006144 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_201 | 79.01 | 81.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_554 | 65.69 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cpor_765 | 74.26 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cpor_841 | 69.90 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cpor_962 | 68.75 | 95.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000021965 retrocopies