Parental gene:

KLHL13, ENSPPYG00000020658

Aliases:None
Description:kelch-like family member 13 [Source:HGNC Symbol;Acc:22931]
Organism:Orangutan (Pongo abelii)
Coordinates:X:116833587..117051328(-)


>ENSPPYG00000020658
ATGGATCATCTGCATAGAGGGGAATTGGTTGCTGCAATACTTCATAACCGATCTCTCGTGGAAGAGGAAGACCAACACAT
GAAATTGTCCCTTGGAGGCAGCGAAATGGGCCTCTCATCCCATTTGCAGTCTTCCAAGGCAGGACCTACACGCATCTTTA
CCAGCAATACCCACAGTTCTGTGGTGTTACAGGGCTTTGACCAGCTTCGACTTGAAGGATTGCTTTGTGATGTGACCCTG
ATGCCAGGTGACACAGATGATGCTTTCCCTGTGCATAGAGTCATGATGGCATCTGCTAGTGATTACTTCAAGGCTATGTT
CACAGGTGGAATGAAAGAACAAGATTTAATGTGCATTAAACTTCATGGTGTCAGCAAAGTTGGTCTAAGGAAAATTATTG
ATTTCATTTATACTGCAAAGCTTTCTCTTAATATGGACAACCTTCAAGACACGCTGGAAGCTGCCAGTTTTCTACAGATT
CTGCCAGTTTTGGACTTCTGTAAAGTATTTCTCATATCTGGGGTCACTTTAGACAATTGTGTTGAAGTTGGACGGATTGC
CAACACCTACAATCTAACCGAAGTGGATAAATATGTTAACAATTTCGTCTTGAAGAATTTTCCTGCATTGCTGAGCACGG
GGGAGTTCTTGAAACTCCCTTTTGAGCGTCTTGCCTTCGTGCTTTCCAGTAATAGCCTTAAGCACTGTACTGAACTTGAG
CTCTTTAAGGCTACCTGTCGTTGGCTTCGCCTGGAAGAGCCTCGGATGGACTTTGCTGCAAAATTAATGAAGAACATACG
ATTTCCACTGATGACACCACAGGAGCTCATTAATTACGTGCAAACGGTGGATTTCATGAGAACTGACAATACTTGTGTGA
ATTTGCTTTTGGAAGCCAGCAATTACCAAATGATGCCATATATGCAGCCAGTTATGCAGTCAGACAGGACTGCCATTAGG
TCTGACACCACTCACTTGGTTACACTAGGAGGAGTGCTGAGGCAGCAGCTGGTTGTCAGTAAGGAATTGCGCATGTATGA
TGAAAAGGCCCATGAGTGGAAATCGTTAGCCCCCATGGATGCCCCAAGGTACCAGCATGGCATCGCCGTCATTGGAAATT
TTCTCTATGTGGTTGGTGGACAGAGTAATTATGATACAAAAGGAAAAACGGCAGTTGATACAGTCTTCAGATTTGATCCT
CGATACAATAAATGGATGCAAGTTGCATCTTTAAATGAAAAGCGCACCTTCTTCCACCTAAGTGCCCTCAAAGGATATCT
GTATGCAGTTGGTGGGCGAAATGCAGCAGGTGAACTGCCCACAGTAGAATGTTACAATCCAAGAACAAATGAATGGACCT
ATGTTGCCAAAATGAGTGAGCCCCACTATGGCCATGCTGGAACTGTGTATGGAGGAGTGATGTATATTTCAGGAGGAATT
ACTCATGATACTTTCCAAAAGGAGCTCATGTGCTTTGACCCTGATGCTGACAAATGGATCCAGAAGGCGCCAATGACCAC
TGTCAGAGGTCTGCATTGCATGTGTACAGTGGGAGAAAGGCTCTATGTCATTGGTGGCAATCACTTCAGAGGAACAAGTG
ATTATGATGATGTCCTAAGCTGTGAATACTATTCACCTATCCTTGACCAGTGGACCCCAATTGCTGCCATGTTAAGAGGG
CAGAGTGATGTTGGGGTCGCTGTTTCGAAAATAAAATCTATGTGGTTGGGGGGTATTCTTGGAATAATCGTTGTATGGTA
G

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .09 RPM
SRP007412_cerebellum 8 .63 RPM
SRP007412_heart 2 .47 RPM
SRP007412_kidney 7 .19 RPM
SRP007412_liver 0 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001782 ortholog_one2one 1 retrogene
retro_amel_749,
Bos taurus ENSBTAG00000000501 ortholog_one2one 1 retrogene
retro_btau_44,
Canis familiaris ENSCAFG00000018272 ortholog_one2one 1 retrogene
retro_cfam_422,
Callithrix jacchus ENSCJAG00000002447 ortholog_one2one 1 retrogene
retro_cjac_3406,
Cavia porcellus ENSCPOG00000011268 ortholog_one2one 1 retrogene
retro_cpor_590,
Equus caballus ENSECAG00000008237 ortholog_one2one 1 retrogene
retro_ecab_622,
Loxodonta africana ENSLAFG00000008122 ortholog_one2one 1 retrogene
retro_lafr_1018,
Myotis lucifugus ENSMLUG00000027393 ortholog_one2one 1 retrogene
retro_mluc_204,
Macaca mulatta ENSMMUG00000002293 ortholog_one2one 1 retrogene
retro_mmul_42,
Mustela putorius furo ENSMPUG00000001730 ortholog_one2one 1 retrogene
retro_mputfur_169,
Mus musculus ENSMUSG00000036782 ortholog_one2one 1 retrogene
retro_mmus_121,
Nomascus leucogenys ENSNLEG00000014736 ortholog_one2one 1 retrogene
retro_nleu_1031,
Oryctolagus cuniculus ENSOCUG00000001993 ortholog_one2one 1 retrogene
retro_ocun_254,
Pteropus vampyrus ENSPVAG00000015989 ortholog_one2one 1 retrogene
retro_pvam_1485,
Rattus norvegicus ENSRNOG00000014029 ortholog_one2one 1 retrogene
retro_rnor_154,
Sus scrofa ENSSSCG00000012637 ortholog_one2many 1 retrogene
retro_sscr_51,
Ictidomys tridecemlineatus ENSSTOG00000012035 ortholog_one2one 1 retrogene
retro_itri_124,
Tarsius syrichta ENSTSYG00000002521 ortholog_one2one 1 retrogene
retro_tsyr_19,
Tursiops truncatus ENSTTRG00000014098 ortholog_one2one 1 retrogene
retro_ttru_26,
Vicugna pacos ENSVPAG00000003091 ortholog_one2one 1 retrogene
retro_vpac_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_60 91.49 94.20
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Download FASTA sequences of all ENSPPYG00000020658 retrocopies