Parental gene:

KLHL13, ENSBTAG00000000501

Aliases:None
Description:Kelch-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:A6QQY2]
Organism:Cow (Bos taurus)
Coordinates:X:1975397..2038024(-)


>ENSBTAG00000000501
ATGCCATTGAAATGGAAAACGAGCTCTCCTGCTATCTGGAAATTCCCAGTTCCTGTGCTTAAAACATCCAGGTCAACTCC
ACTTTCTCCAGCATACATATCTCTAGTGGAAGAGGAAGACCAGCACATGAAATTGTCCCTTGGAAGCAGCGAAATGGGCC
TCTCTTCCCATTTGCAGTCTTCCAAGGCCGGAACCACACGCATCTTTACCAGCAATACCCATAGTTCTGTGGTGTTACAG
GGATTTGACCAGCTCCGACTTGAAGGATTGCTCTGTGACGTGACCCTGATGCCAGGGGACACAGATGATGCCTTCCCTGT
GCACAGAGTCATGATGGCCTCTGCTAGTGATTACTTCAAGGCTATGTTCACAGGTGGGATGAAAGAACAAGATTTAATGT
GCATTAAGCTTCATGGCGTGAGCAAAGTCGGTTTAAGGAAAATTATTGACTTCATTTACACTGCAAAGCTTTCTCTTAAT
ATGGACAACCTTCAAGACACACTGGAAGCTGCCAGTTTTCTACAGATTCTGCCGGTTTTGGACTTCTGCAAAGTTTTTCT
CATATCTGGGGTCACTTTAGACAATTGTGTTGAAGTTGGGCGGATTGCCAATACCTACAATCTGACAGAAGTGGATAAAT
ATGTTAACAGTTTCGTCTTGAAGAATTTTCCTGCGTTGCTGAGCACTGGGGAGTTCTTGAAACTCCCTTTTGAACGTCTT
GCCTTCGTGCTTTCCAGTAATAGCCTTAAGCATTGCACTGAACTTGAGCTCTTTAAGGCTACCTGTCGCTGGCTACGCCT
GGAAGAGCCTCGGATGGACTTTGCTGCAAAGTTAATGAAGAACATACGATTTCCACTGATGACACCGCAGGAGCTCATTA
ATTACGTGCAAACCGTGGATTTCATGAGAACTGACAATACGTGTGTGAATCTCCTTTTGGAAGCCAGCAATTATCAAATG
ATGCCATATATGCAGCCAGTGATGCAGTCAGACAGGACTGCCATTCGGTCTGACACCACTCATTTGGTTACACTAGGAGG
AGTGCTGAGGCAGCAGCTGGTTGTCAGCAAGGAATTGCGCATGTATGATGAAAAGGCCCATGAGTGGAAGTCCTTAGCCC
CCATGGATGCCCCAAGGTACCAGCATGGCATTGCCGTCATTGGAAATTTCCTCTACGTCGTTGGAGGACAGAGCAATTAT
GACACAAAAGGAAAAACGGCAGTTGATACAGTCTTCAGATTTGATCCACGATACAATAAGTGGATGCAAGTTGCATCTCT
AAATGAAAAGCGCACCTTCTTCCACCTCAGTGCCCTCAAAGGATACCTGTATGCAGTTGGTGGACGAAATGCAGCTGGTG
AACTGCCTACAGTAGAATGTTACAATCCGAGAACAAACGAATGGACCTATGTTGCCAAAATGAGTGAGCCCCACTATGGC
CATGCTGGAACTGTGTATGGAGGCGTAATGTATATATCAGGAGGAATTACTCATGACACTTTCCAAAAGGAGCTCATGTG
CTTTGACCCTGATACTGACAAATGGATCCAGAAGGCGCCAATGACCACTGTCAGAGGTCTGCATTGCATGTGCACTGTGG
GAGAAAGGCTCTACGTCATCGGCGGCAATCACTTCAGAGGAACCAGTGATTATGACGACGTCCTAAGCTGTGAATACTAC
TCACCGATCCTTGACCAGTGGACCCCAATTGCTGCTATGTTAAGAGGGCAGAGTGATGTTGGGGTCGCTGTCTTTGAAAA
TAAAATCTACGTGGTTGGTGGGTATTCGTGGAATAATCGTTGTATGGTAGAGATCGTGCAGAAATATGATCCAGATAAAG
ATGAATGGCATAAGGTATTTGATCTCCCAGAATCCCTGGGTGGCATCCGAGCTTGCACACTCACGGTTTTTCCACCTGAA
GAAACCACACCATCACCTTCTAGAGAGTCCCCTCTTTCTGCACCATAA

Library Parental gene expression (RPM)
SRP017611_brain 45 .59 RPM
SRP017611_kidney 33 .55 RPM
SRP017611_liver 8 .61 RPM
ERP005899_muscle 8 .02 RPM
ERP005899_liver 18 .53 RPM
SRP030211_testis 8 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001782 ortholog_one2one 1 retrogene
retro_amel_749,
Canis familiaris ENSCAFG00000018272 ortholog_one2one 1 retrogene
retro_cfam_422,
Callithrix jacchus ENSCJAG00000002447 ortholog_one2one 1 retrogene
retro_cjac_3406,
Cavia porcellus ENSCPOG00000011268 ortholog_one2one 1 retrogene
retro_cpor_590,
Equus caballus ENSECAG00000008237 ortholog_one2one 1 retrogene
retro_ecab_622,
Loxodonta africana ENSLAFG00000008122 ortholog_one2one 1 retrogene
retro_lafr_1018,
Myotis lucifugus ENSMLUG00000027393 ortholog_one2one 1 retrogene
retro_mluc_204,
Macaca mulatta ENSMMUG00000002293 ortholog_one2one 1 retrogene
retro_mmul_42,
Mustela putorius furo ENSMPUG00000001730 ortholog_one2one 1 retrogene
retro_mputfur_169,
Mus musculus ENSMUSG00000036782 ortholog_one2one 1 retrogene
retro_mmus_121,
Nomascus leucogenys ENSNLEG00000014736 ortholog_one2one 1 retrogene
retro_nleu_1031,
Oryctolagus cuniculus ENSOCUG00000001993 ortholog_one2one 1 retrogene
retro_ocun_254,
Pongo abelii ENSPPYG00000020658 ortholog_one2one 1 retrogene
retro_pabe_60,
Rattus norvegicus ENSRNOG00000014029 ortholog_one2one 1 retrogene
retro_rnor_154,
Sus scrofa ENSSSCG00000012637 ortholog_one2one 1 retrogene
retro_sscr_51,
Ictidomys tridecemlineatus ENSSTOG00000012035 ortholog_one2one 1 retrogene
retro_itri_124,
Tarsius syrichta ENSTSYG00000002521 ortholog_one2one 1 retrogene
retro_tsyr_19,
Tursiops truncatus ENSTTRG00000014098 ortholog_one2one 1 retrogene
retro_ttru_26,
Vicugna pacos ENSVPAG00000003091 ortholog_one2one 1 retrogene
retro_vpac_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_44 92.50 93.59
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Download FASTA sequences of all ENSBTAG00000000501 retrocopies