Parental gene:

KLHL13, ENSCAFG00000018272

Aliases:None
Description:kelch-like family member 13 [Source:HGNC Symbol;Acc:22931]
Organism:Dog (Canis familiaris)
Coordinates:X:90138372..90220773(-)


>ENSCAFG00000018272
ATGCCATTGAAATGGAAAACGAGCTCTCCTGCTATCTGGAAATTCCCAGTTCCTGTGCTTAAAACATCCAGGTCAACTCC
ACTTTCTCCAGCATACATATCTCTAGTGGAAGAGGAAGACCAACACATGAAATTGTCCCTTGGAAGCAGCGAAATGGGTC
TCTCATCCCATCTGCAGTCTTCCAAGGCAGGAACCACACGCATCTTTACCAGCAATACCCACAGTTCTGTGGTGTTACAG
GGCTTTGACCAGCTTCGACTTGAAGGATTGCTTTGTGACGTGACTCTGATGCCAGGTGACACAGATGATGCCTTTCCTGT
GCATAGAGTCATGATGGCCTCTGCTAGTGATTACTTCAAGGCTATGTTCACAGGTGGAATGAAAGAACAAGATTTAATGT
GCATTAAGCTTCATGGTGTGAGCAAAGTCGGCTTAAGGAAAATTATTGATTTCATTTATACTGCAAAGCTTTCTCTCAAC
ATGGACAACCTTCAAGACACACTGGAAGCTGCCAGTTTCCTACAGATTCTGCCGGTTTTGGACTTCTGCAAAGTATTTCT
CATATCTGGGGTCACTTTAGACAATTGTGTCGAAGTTGGTCGGATTGCCAACACCTACAATCTTACAGAAGTGGATAAAT
ACGTCAACAGTTTTGTTTTGAAGAATTTTCCTGCATTGCTGAGCACCGGGGAGTTCTTAAAACTCCCTTTTGAGCGTCTT
GCCTTTGTGCTTTCCAGTAATAGCCTTAAGCACTGCACTGAACTTGAGCTCTTTAAGGCTACCTGTCGCTGGCTACGTCT
AGAAGAGCCTCGGATGGACTTTGCTGCAAAACTAATGAAGAACATACGATTTCCACTGATGACACCACAGGAGCTCATTA
ATTATGTGCAAACCGTGGATTTCATGAGAACTGACAATACTTGTGTGAATCTCCTTTTGGAAGCCAGCAATTACCAAATG
ATGCCATATATGCAACCAGTGATGCAGTCAGACAGGACTGCCATTCGGTCTGACACCACTCATTTGGTCACACTAGGAGG
AGTTCTGAGGCAGCAGCTAGTTGTCAGCAAGGAATTGCGCATGTATGATGAAAAGGCCCATGAATGGAAATCGTTAGCCC
CCATGGATGCTCCAAGGTACCAGCATGGCATTGCTGTCATTGGAAATTTCCTCTATGTCGTTGGTGGACAGAGTAATTAT
GACACAAAAGGAAAAACAGCAGTTGATACAGTCTTCAGATTTGATCCTCGATACAATAAATGGATGCAAGTTGCATCTTT
AAATGAAAAGCGCACCTTCTTCCACCTAAGTGCCCTCAAAGGATATCTGTATGCAGTTGGTGGGCGAAATGCAGCTGGTG
AACTGCCCACAGTAGAGTGTTACAATCCAAGAACAAACGAGTGGACCTACGTTGCCAAAATGAGTGAACCCCACTATGGC
CATGCTGGGACTGTGTATGGAGGAGTAATGTATATTTCAGGAGGAATCACTCATGACACTTTCCAAAAGGAGCTGATGTG
CTTTGACCCTGATACTGACAAATGGATCCAGAAGGCACCGATGACCACCGTCAGAGGTCTGCACTGCATGTGTACGGTGG
GAGAGAGGCTCTATGTCATTGGTGGTAATCACTTCCGAGGAACAAGTGATTATGATGATGTCCTGAGCTGTGAATACTAC
TCACCTATTCTTGACCAGTGGACCCCAATTGCTGCCATGTTAAGGGGGCAGAGTGATGTTGGGGTTGCCGTCTTTGAAAA
CAAAATCTATGTGGTTGGGGGATACTCCTGGAATAATCGCTGTATGGTGGAGATAGTGCAGAAATATGACCCAGATAAAG
ATGAGTGGCATAAGGTTTTCGATCTGCCTGAGTCCCTTGGTGGCATCCGAGCTTGTACGCTCACGGTTTTTCCACCCGAA
GAAACCACACCATCACCTTCTAGAGAATCCCCTCTTTCTGCACCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 22 .39 RPM
SRP017611_kidney 7 .79 RPM
SRP017611_liver 0 .15 RPM
SRP012049_cerebellum 24 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001782 ortholog_one2one 1 retrogene
retro_amel_749,
Bos taurus ENSBTAG00000000501 ortholog_one2one 1 retrogene
retro_btau_44,
Callithrix jacchus ENSCJAG00000002447 ortholog_one2one 1 retrogene
retro_cjac_3406,
Cavia porcellus ENSCPOG00000011268 ortholog_one2one 1 retrogene
retro_cpor_590,
Equus caballus ENSECAG00000008237 ortholog_one2one 1 retrogene
retro_ecab_622,
Loxodonta africana ENSLAFG00000008122 ortholog_one2one 1 retrogene
retro_lafr_1018,
Myotis lucifugus ENSMLUG00000027393 ortholog_one2one 1 retrogene
retro_mluc_204,
Macaca mulatta ENSMMUG00000002293 ortholog_one2one 1 retrogene
retro_mmul_42,
Mustela putorius furo ENSMPUG00000001730 ortholog_one2one 1 retrogene
retro_mputfur_169,
Mus musculus ENSMUSG00000036782 ortholog_one2one 1 retrogene
retro_mmus_121,
Nomascus leucogenys ENSNLEG00000014736 ortholog_one2one 1 retrogene
retro_nleu_1031,
Oryctolagus cuniculus ENSOCUG00000001993 ortholog_one2one 1 retrogene
retro_ocun_254,
Pongo abelii ENSPPYG00000020658 ortholog_one2one 1 retrogene
retro_pabe_60,
Rattus norvegicus ENSRNOG00000014029 ortholog_one2one 1 retrogene
retro_rnor_154,
Sus scrofa ENSSSCG00000012637 ortholog_one2one 1 retrogene
retro_sscr_51,
Ictidomys tridecemlineatus ENSSTOG00000012035 ortholog_one2one 1 retrogene
retro_itri_124,
Tarsius syrichta ENSTSYG00000002521 ortholog_one2one 1 retrogene
retro_tsyr_19,
Tursiops truncatus ENSTTRG00000014098 ortholog_one2one 1 retrogene
retro_ttru_26,
Vicugna pacos ENSVPAG00000003091 ortholog_one2one 1 retrogene
retro_vpac_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_422 90.74 97.10
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Download FASTA sequences of all ENSCAFG00000018272 retrocopies