Parental gene:

KLHL13, ENSCPOG00000011268

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_46:1765802..1829203(+)


>ENSCPOG00000011268
ATGCCATTGAAATGGAAAACGAGCTCTCCTGCTATCTGGAAATTCCCAGTTCCTGTGCTTAAAACATCCAGGTCAACTCC
ACTTTCTCCAGCATACATATCTCTTGTGGAAGAAGACGACCAACATATGAGATTGTCCCTTGGAAGCAGCGAAATGGGCC
TGTCTTCCCATTTGCAGTCTTCCAAGGCAGGAACCACACGCATCTTTACCAGCAATACCCACAGTTCTGTCGTGTTACAG
GGCTTTGACCAGCTTCGACTTGAAGGATTGCTTTGCGATGTGACCCTGATGCCAGGTGATACGGATGATGCCTTCCCAGT
GCATAGAGTCATGATGGCATCTGCTAGTGATTACTTCAAAGCTATGTTCACAGGTGGAATGAAAGAACAAGATTTAATGT
GTATTAAGCTTCATGGTGTGAGCAAAGTTGGTCTAAGGAAAATTATTGATTTCATTTATACTGCAAAGCTTTCTCTTAAT
ATGGACAACCTTCAAGACACACTGGAAGCTGCCAGCTTTCTACAGATTCTACCGGTTTTGGACTTCTGTAAAGTATTTCT
CATATCTGGGGTCACTTTAGACAATTGTGTCGAAGTTGGGCGGATTGCAAACACTTACAATCTGACAGAAGTGGATAAAT
ATGTCAATAGTTATGTCTTAAAGAATTTCCCTGCATTGCTGAGCACTGGGGAGTTTTTGAAACTCCCTTTTGAGCGTCTT
GCCTTTGTGCTTTCCAGTAATAGCCTTAAACACTGCACTGAACTTGAGCTTTTTAAGGCTACCTGTCGCTGGCTTCGCCT
GGAAGAGCCTCGGATGGACTTTGCTGCAAAATTAATGAAGAACATCCGATTTCCACTGATGACACCACAGGAGCTCATTA
ATTACGTGCAAACAGTAGATTTCATGAGAACTGACAATACTTGCGTGAATTTGCTTTTGGAAGCCAGCAATTACCAAATG
ATGCCATATATGCAGCCAGTTATGCAGTCAGACAGGACTGCCATTAGGTCTGACACCACTCACTTGGTTACACTAGGAGG
AGTGCTGAGACAGCAACTGGTTGTCAGTAAGGAATTACGCATGTATGATGAAAAGGCCCATGAGTGGCGATCCTTAGCTC
CCATGGATGCCCCAAGGTACCAACATGGCATCGCTGTCATCGGAAACTTCCTCTATGTTGTTGGTGGACAGAGTAATTAT
GACACAAAAGGAAAAACAGCAGTCGATACAGTGTTCAGGTTTGATCCTCGATATAATAAATGGATGCAAGTTGCATCTTT
AAATGAAAAGCGCACCTTCTTCCACCTAAGTGCCCTCAAAGGATATCTGTATGCAGTTGGTGGACGAAATGCAGCTGGGG
AACTGCCTACAGTAGAATGTTATAATCCAAGAACAAATGAATGGACCTATGTTGCCAAAATGAGTGAGCCTCACTATGGA
CATGCTGGAACTGTGTATGGAGGGGTGATGTATATTTCAGGAGGAATTACTCATGACACTTTCCAAAAAGAGCTGATGTG
CTTTGACCCTGATACTGACAAATGGATCCAGAAGGCACCAATGACCACTGTTCGAGGTCTGCATTGCATGTGTACAGTGG
GAGAAAGGCTGTATGTCATTGGTGGCAATCATTTCAGAGGAACCAGTGATTATGATGATGTCCTAAGCTGTGAATACTAT
TCACCTATCCTCGATCAGTGGACCCCTATTGCTGCCATGCTAAGAGGGCAGAGTGATGTTGGGGTTGCAGTCTTTGAAAA
CAAAATCTATGTGGTTGGTGGGTATTCTTGGAATAATCGGTGTATGGTAGAGATAGTGCAGAAATATGATCCAGATAAAG
ATGAGTGGCATAAGGTATTTGATCTCCCAGAATCCCTTGGTGGCATTCGAGCTTGTACACTTACAGTTTTCCCACCTGAA
GAAACCACACCATCACCTTCTAGAGAGTCCCCTCTCTCTGCACCCTAA

Library Parental gene expression (RPM)
SRP017611_liver 1 .18 RPM
SRP017611_kidney 21 .57 RPM
SRP017611_brain 19 .90 RPM
SRP040447_lung 11 .27 RPM
SRP040447_skeletal_muscle 17 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001782 ortholog_one2one 1 retrogene
retro_amel_749,
Bos taurus ENSBTAG00000000501 ortholog_one2one 1 retrogene
retro_btau_44,
Canis familiaris ENSCAFG00000018272 ortholog_one2one 1 retrogene
retro_cfam_422,
Callithrix jacchus ENSCJAG00000002447 ortholog_one2one 1 retrogene
retro_cjac_3406,
Equus caballus ENSECAG00000008237 ortholog_one2one 1 retrogene
retro_ecab_622,
Loxodonta africana ENSLAFG00000008122 ortholog_one2one 1 retrogene
retro_lafr_1018,
Myotis lucifugus ENSMLUG00000027393 ortholog_one2one 1 retrogene
retro_mluc_204,
Macaca mulatta ENSMMUG00000002293 ortholog_one2one 1 retrogene
retro_mmul_42,
Mustela putorius furo ENSMPUG00000001730 ortholog_one2one 1 retrogene
retro_mputfur_169,
Mus musculus ENSMUSG00000036782 ortholog_one2one 1 retrogene
retro_mmus_121,
Nomascus leucogenys ENSNLEG00000014736 ortholog_one2one 1 retrogene
retro_nleu_1031,
Oryctolagus cuniculus ENSOCUG00000001993 ortholog_one2one 1 retrogene
retro_ocun_254,
Pongo abelii ENSPPYG00000020658 ortholog_one2one 1 retrogene
retro_pabe_60,
Pteropus vampyrus ENSPVAG00000015989 ortholog_one2one 1 retrogene
retro_pvam_1485,
Rattus norvegicus ENSRNOG00000014029 ortholog_one2one 1 retrogene
retro_rnor_154,
Sus scrofa ENSSSCG00000012637 ortholog_one2many 1 retrogene
retro_sscr_51,
Ictidomys tridecemlineatus ENSSTOG00000012035 ortholog_one2one 1 retrogene
retro_itri_124,
Tarsius syrichta ENSTSYG00000002521 ortholog_one2one 1 retrogene
retro_tsyr_19,
Tursiops truncatus ENSTTRG00000014098 ortholog_one2one 1 retrogene
retro_ttru_26,
Vicugna pacos ENSVPAG00000003091 ortholog_one2one 1 retrogene
retro_vpac_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_590 91.76 94.50
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Download FASTA sequences of all ENSCPOG00000011268 retrocopies