Parental gene:

ENSPPYG00000017191

Aliases:None
Description:Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:H2PXL7]
Organism:Orangutan (Pongo abelii)
Coordinates:6:174123750..174142913(-)


>ENSPPYG00000017191
ATGTTGTCCTCTACAGCCATGTATTCGGCTCCTGGCAGAGACTTGGGGATGGAACCGCACAGAGCCGCGGGCCCTTTGCA
GCTGCGATTTTCGCCCTACGTTTTCAACGGAGGTACTGTATTGGCAATTGCTGGAGAAGATTTTGCAATTGTTGCTTCTG
ATACTCGATTGAGTGAAGGGTTTTCAATTCATACGCGGGATAGCCCCAAATGTTACAAATTAACAGACAAAACAGTCATT
GGATGCAGCGGTTTTCATGGAGACTGTCTTACGCTGACAAAGATTATTGAAGCAAGACTAAAGATGTATAAGCATTCCAA
TAATAAGGCCATGACTACGGGGGCAATTGCTGCAATGCTGTCTACAATCCTGTATTCAAGGCGCTTCTTTCCATACTATG
TTTACAACATCATCGGTGGACTTGATGAAGAAGGAAAGGGGGCTGTATACAGCTTTGACCCAGTAGGGTCTTACCAGAGA
GACTCCTTCAAGGCTGGAGGCTCAGCAAGTGCCATGCTACAGCCCCTGCTTGACAACCAGGTTGGTTTTAAGAACATGCA
GAATGTGGAGCATGTTCCGCTGTCCTTGGACAGAGCCATGCGGCTGGTGAAAGATGTCTTCATTTCTGCAGCTGAGAGAG
ATGTGTACACTGGGGACGCACTGCGGATCTGCATAGTGACCAAAGAGGGCATCAGGGAGGAGACTGTTCCCTTAAGGAAG
GACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .81 RPM
SRP007412_cerebellum 7 .05 RPM
SRP007412_heart 4 .97 RPM
SRP007412_kidney 8 .02 RPM
SRP007412_liver 14 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017047 ortholog_one2many 1 retrogene
retro_amel_1066,
Canis familiaris ENSCAFG00000004116 ortholog_one2many 1 retrogene
retro_cfam_2108,
Callithrix jacchus ENSCJAG00000020644 ortholog_one2many 1 retrogene
retro_cjac_632,
Dasypus novemcinctus ENSDNOG00000019502 ortholog_one2many 1 retrogene
retro_dnov_2087,
Felis catus ENSFCAG00000031269 ortholog_one2many 1 retrogene
retro_fcat_911,
Gorilla gorilla ENSGGOG00000022128 ortholog_one2many 1 retrogene
retro_ggor_1661,
Microcebus murinus ENSMICG00000007469 ortholog_one2many 1 retrogene
retro_mmur_173,
Macaca mulatta ENSMMUG00000019919 ortholog_one2many 1 retrogene
retro_mmul_1135,
Mustela putorius furo ENSMPUG00000007150 ortholog_one2many 1 retrogene
retro_mputfur_1196,
Mus musculus ENSMUSG00000014769 ortholog_one2many 2 retrogenes
retro_mmus_1784, retro_mmus_3664,
Oryctolagus cuniculus ENSOCUG00000007973 ortholog_one2many 2 retrogenes
retro_ocun_1029, retro_ocun_620,
Procavia capensis ENSPCAG00000000344 ortholog_one2many 1 retrogene
retro_pcap_329,
Vicugna pacos ENSVPAG00000006517 ortholog_one2many 1 retrogene
retro_vpac_521,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_130 100.00 100.00
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Download FASTA sequences of all ENSPPYG00000017191 retrocopies