Parental gene:

MMU.2378, ENSMMUG00000019919

Aliases:None
Description:proteasome subunit beta type-1 [Source:RefSeq peptide;Acc:NP_001247565]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:4:167539626..167558559(-)


>ENSMMUG00000019919
ATGTTGTCCTCCGTAGCCATGTATTCGGCTCCTGGCAGAGACTTGGGGATGGAGCCGCACGGAGCCGCGGGCCCTTTGCA
GCTGCGATTTTCGCCCTACGCTTTCAACGGAGGTACTGTACTGGCAATTGCTGGAGAAGATTTTGCAATTGTTGCTTCTG
ATACTCGACTGAGTGAAGGGTTTTCAATTCATACCCGGGATAGCCCCAAATGTTACAAATTAACAGACAAAACAGTCATT
GGATGCAGTGGTTTTCATGGAGACTGCCTTACCCTGACAAAGATTATTGAAGCAAGACTAAAGATGTATAAGCATTCCAA
TAATAAGGCCATGACTACGGGGGCAATTGCTGCGATGCTGTCTACGATCCTGTATTCAAGGCGCTTCTTTCCATACTATG
TTTACAACATCATCGGTGGACTTGATGAAGAAGGAAAGGGGGCTGTATACAGCTTTGACCCAGTAGGGTCTTACCAGAGA
GACTCCTTCAAGGCTGGAGGCTCAGCAAGTGCCATGCTACAGCCCCTGCTTGACAACCAGGTTGGTTTTAAGAACATGCA
GAACGTGGAGCATGTCCCGCTGTCCTTGGACAGAGCCATGCGGCTGGTGAAAGATGTCTTTATTTCTGCGGCTGAGAGAG
ACGTGTACACTGGGGACGCGCTCCGGATCTGCATAGTGACCAAAGAGGGCATCAGGGAGGAGACTGTTCCCTTAAGGAAG
GACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 61 .80 RPM
SRP007412_brain 47 .29 RPM
SRP007412_cerebellum 32 .93 RPM
SRP007412_heart 36 .16 RPM
SRP007412_kidney 59 .39 RPM
SRP007412_liver 77 .07 RPM
SRP007412_testis 42 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017047 ortholog_one2one 1 retrogene
retro_amel_1066,
Canis familiaris ENSCAFG00000004116 ortholog_one2one 1 retrogene
retro_cfam_2108,
Callithrix jacchus ENSCJAG00000020644 ortholog_one2one 1 retrogene
retro_cjac_632,
Dasypus novemcinctus ENSDNOG00000019502 ortholog_one2one 1 retrogene
retro_dnov_2087,
Felis catus ENSFCAG00000031269 ortholog_one2one 1 retrogene
retro_fcat_911,
Gorilla gorilla ENSGGOG00000022128 ortholog_one2one 1 retrogene
retro_ggor_1661,
Microcebus murinus ENSMICG00000007469 ortholog_one2one 1 retrogene
retro_mmur_173,
Mustela putorius furo ENSMPUG00000007150 ortholog_one2one 1 retrogene
retro_mputfur_1196,
Mus musculus ENSMUSG00000014769 ortholog_one2one 2 retrogenes
retro_mmus_1784, retro_mmus_3664,
Oryctolagus cuniculus ENSOCUG00000007973 ortholog_one2one 2 retrogenes
retro_ocun_1029, retro_ocun_620,
Procavia capensis ENSPCAG00000000344 ortholog_one2one 1 retrogene
retro_pcap_329,
Pongo abelii ENSPPYG00000017191 ortholog_one2many 1 retrogene
retro_pabe_130,
Vicugna pacos ENSVPAG00000006517 ortholog_one2one 1 retrogene
retro_vpac_521,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1135 63.12 56.02
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Download FASTA sequences of all ENSMMUG00000019919 retrocopies