Parental gene:

ENSOCUG00000000525

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:18:5991800..6012425(+)


>ENSOCUG00000000525
ATGGAGGGCGGCGGAGGAAGCGGCAACAAAACCACAGGGGGCTTGGCTGGCTTTTTCGGAGCCGGCGGAGCAGGTTACTC
GCACGCAGACCTGGCCGGCGTCCCGCTAACTGGAATGAATCCTCTGTCTCCTTATTTAAATGTGGATCCACGGTATCTTG
TGCAGGATACAGATGAGTTTATTTTACCAACGGGAGCTAATAAAACCCGGGGCAGATTCGAGTTGGCCTTCTTTACTATT
GGAGGATGTTGCATGACAGGGGCTGCATTTGGGGCAGTGAACGGTCTTCGGCTAGGATTGAAGGAAACCCAGAACATGGC
CTGGTCCAAACCAAGAAACGTACAGATTTTGAATATGGTGACTAGGCAAGGTGCACTTTGGGCTAATACTCTAGGATCTC
TGGCTTTGCTCTATAGTGCATTTGGTGTCATCATTGAGAAAACTCGCGGGGCAGAAGATGACCTGAACACAGTAGCAGCC
GGAACCATGACGGGCATGTTGTATAAATGCACAGGTGGTCTCCGAGGGGCAGCACGAGGCGGCCTGGCAGGACTCACTCT
CACTGGCCTCTACGCGCTCTACAACAACTGGGAGCACATGAAAGGCTCCCTGCTGCAGCAGTCGCTCTGA

Library Parental gene expression (RPM)
SRP017611_liver 4 .55 RPM
SRP017611_kidney 13 .48 RPM
SRP017611_brain 23 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007501 ortholog_one2many 1 retrogene
retro_amel_1488,
Canis familiaris ENSCAFG00000029477 ortholog_one2many 1 retrogene
retro_cfam_329,
Choloepus hoffmanni ENSCHOG00000007073 ortholog_one2many 1 retrogene
retro_chof_797,
Callithrix jacchus ENSCJAG00000013336 ortholog_one2many 1 retrogene
retro_cjac_2965,
Cavia porcellus ENSCPOG00000019917 ortholog_one2many 2 retrogenes
retro_cpor_1013, retro_cpor_321,
Monodelphis domestica ENSMODG00000002661 ortholog_one2many 2 retrogenes
retro_mdom_1202, retro_mdom_860,
Mus musculus ENSMUSG00000013701 ortholog_many2many 1 retrogene
retro_mmus_2,
Otolemur garnettii ENSOGAG00000015393 ortholog_one2many 1 retrogene
retro_ogar_2627,
Ochotona princeps ENSOPRG00000005255 ortholog_one2many 2 retrogenes
retro_opri_520, retro_opri_920,
Procavia capensis ENSPCAG00000015914 ortholog_one2many 1 retrogene
retro_pcap_181,
Rattus norvegicus ENSRNOG00000019811 ortholog_many2many 3 retrogenes
retro_rnor_1804, retro_rnor_225, retro_rnor_661,
Sorex araneus ENSSARG00000010335 ortholog_one2many 1 retrogene
retro_sara_86,
Sus scrofa ENSSSCG00000025276 ortholog_one2many 1 retrogene
retro_sscr_404,
Ictidomys tridecemlineatus ENSSTOG00000007041 ortholog_one2many 1 retrogene
retro_itri_1043,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_73 100.00 100.00
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Download FASTA sequences of all ENSOCUG00000000525 retrocopies