Parental gene: | ENSMODG00000002661 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:70286302..70308968(+) |
>ENSMODG00000002661
ATGGAGGGCAACGGAGGCAACAGCAACAGGAGCTCGGGAGGCCTGGCTGGGTTCTTCGGTGGGAGCGGCGGCGGGCCGAG
CTACTCGAACGCAGATTTGGCCGGAGTTCCTCTTACTGGTATGAGTCCTCTGTCTCCGTATTTAAATGTGGATCCCAGAT
ATCTTATACAGGACACAGATGAGTTTATTTTACCCACTGGAGCCAATAAAACACGGGGCAGGTTTGAATTGGCCTTTTTT
ACCATTGGAGGATGCTGTATAACAGGAGCTGCATTTGGAGCAATGAATGGTTTAAGACTGGGATTGAAGGAAACACAAAA
AATGTCCTGGTCCAAGCCACGAAATGTACAGATTTTGAATATGGTAACCAGGCAAGGAGCACTATGGGCTAATACTCTGG
GCTCTCTGGCTCTGCTCTACAGTGCATTTGGTGTTGTCATAGAAAAAACACGAGGTGCAGAAGATGACATCAATACAGTA
GCAGCTGGGACCATGACAGGAATGTTATATAAATGTACAGGTGGTCTTCGTGGAGTAGCAAGAGGTGGTCTGACAGGGCT
AACCCTTACTAGCCTATATGCATTATATAACAACTGGGAACACATGAAAGGTTCCATGACACAACAGTCACTTTAG
ATGGAGGGCAACGGAGGCAACAGCAACAGGAGCTCGGGAGGCCTGGCTGGGTTCTTCGGTGGGAGCGGCGGCGGGCCGAG
CTACTCGAACGCAGATTTGGCCGGAGTTCCTCTTACTGGTATGAGTCCTCTGTCTCCGTATTTAAATGTGGATCCCAGAT
ATCTTATACAGGACACAGATGAGTTTATTTTACCCACTGGAGCCAATAAAACACGGGGCAGGTTTGAATTGGCCTTTTTT
ACCATTGGAGGATGCTGTATAACAGGAGCTGCATTTGGAGCAATGAATGGTTTAAGACTGGGATTGAAGGAAACACAAAA
AATGTCCTGGTCCAAGCCACGAAATGTACAGATTTTGAATATGGTAACCAGGCAAGGAGCACTATGGGCTAATACTCTGG
GCTCTCTGGCTCTGCTCTACAGTGCATTTGGTGTTGTCATAGAAAAAACACGAGGTGCAGAAGATGACATCAATACAGTA
GCAGCTGGGACCATGACAGGAATGTTATATAAATGTACAGGTGGTCTTCGTGGAGTAGCAAGAGGTGGTCTGACAGGGCT
AACCCTTACTAGCCTATATGCATTATATAACAACTGGGAACACATGAAAGGTTCCATGACACAACAGTCACTTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 215 .15 RPM |
| SRP007412_cerebellum | 243 .21 RPM |
| SRP007412_heart | 328 .13 RPM |
| SRP007412_kidney | 341 .06 RPM |
| SRP007412_liver | 328 .78 RPM |
| SRP007412_testis | 478 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007501 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000029477 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000007073 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013336 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000019917 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000013701 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000000525 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015393 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000005255 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000015914 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019811 | ortholog_one2many | 3 retrogenes | |
| Sorex araneus | ENSSARG00000010335 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000025276 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000007041 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_860 | 91.07 | 77.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1202 | 87.96 | 51.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000002661 retrocopies