Parental gene: | ENSCPOG00000019917 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_62:3494468..3516815(-) |
>ENSCPOG00000019917
ATGGAGGGCGGTGGGGGCAGTGGCAACAAAACCACAGGAGGTTTGGCCGGCTTTTTTGGAGCCGGCGGAGCTGGTTACTC
GCATGCAGATTTGGCCGGCGTCCCGCTAACTGGTATGAATCCTTTGTCTCCTTATTTAAATGTGGATCCACGATATCTTG
TGCAGGATACTGATGAGTTTATCTTACCGACTGGAGCTAATAAAACCCGGGGCAGGTTTGAGCTGGCCTTCTTCACCATT
GGAGGATGCTGCATGACGGGGGCTGCGTTTGGGGCAGTGAATGGTCTTCGGCTAGGATTGAAGGAAACCCAGAACATGGC
CTGGTCCAAACCAAGAAATGTACAGATTTTGAATATGGTTACTAGGCAAGGGGCACTGTGGGCCAATACTCTAGGTTCTC
TGGCTCTGCTCTATAGTGCATTTGGTGTTATCATTGAGAAAACACGAGGTGCAGAAGATGATCTGAACACAGTGGCAGCT
GGAACCATGACGGGCATGCTGTATAAATGTACAGGTGGGCTTCGAGGGGTCGCACGAGGGGGTCTAGCAGGCCTCACGCT
TACCGGCCTGTATGCACTGTATAACAACTGGGAGCACATGAAGGGCTCCTTGCTCCACCAGTCACTCTGA
ATGGAGGGCGGTGGGGGCAGTGGCAACAAAACCACAGGAGGTTTGGCCGGCTTTTTTGGAGCCGGCGGAGCTGGTTACTC
GCATGCAGATTTGGCCGGCGTCCCGCTAACTGGTATGAATCCTTTGTCTCCTTATTTAAATGTGGATCCACGATATCTTG
TGCAGGATACTGATGAGTTTATCTTACCGACTGGAGCTAATAAAACCCGGGGCAGGTTTGAGCTGGCCTTCTTCACCATT
GGAGGATGCTGCATGACGGGGGCTGCGTTTGGGGCAGTGAATGGTCTTCGGCTAGGATTGAAGGAAACCCAGAACATGGC
CTGGTCCAAACCAAGAAATGTACAGATTTTGAATATGGTTACTAGGCAAGGGGCACTGTGGGCCAATACTCTAGGTTCTC
TGGCTCTGCTCTATAGTGCATTTGGTGTTATCATTGAGAAAACACGAGGTGCAGAAGATGATCTGAACACAGTGGCAGCT
GGAACCATGACGGGCATGCTGTATAAATGTACAGGTGGGCTTCGAGGGGTCGCACGAGGGGGTCTAGCAGGCCTCACGCT
TACCGGCCTGTATGCACTGTATAACAACTGGGAGCACATGAAGGGCTCCTTGCTCCACCAGTCACTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 17 .67 RPM |
| SRP017611_kidney | 32 .66 RPM |
| SRP017611_brain | 17 .25 RPM |
| SRP040447_lung | 14 .63 RPM |
| SRP040447_skeletal_muscle | 40 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007501 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000029477 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000007073 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013336 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002661 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000013701 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000000525 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015393 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000005255 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000015914 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019811 | ortholog_one2many | 3 retrogenes | |
| Sorex araneus | ENSSARG00000010335 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000025276 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000007041 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_321 | 72.67 | 81.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_1013 | 79.53 | 60.29 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000019917 retrocopies