Parental gene: | MMU.1754, ENSMMUG00000017569 |
| Aliases: | None |
| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [Source:RefSeq peptide;Acc:NP_001245264] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | X:39102069..39116427(+) |
>ENSMMUG00000017569
ATGAGTCATGTGGCGGTGGAAAATGCGCTCGGGCTGGACCAGCAGTTTGCTGGCCTAGACCTGAACTCTTCAGATAATCA
GAGTGGAGGAAGTACAGCCAGCAAAGGGCGCTATATTCCTCCTCATTTAAGGAACCGAGAAGCTACTAAAGGTTTCTACG
ACAAAGACAGTTCAGGGTGGAGTTCTAGCAAAGATAAGGATGCGTATAGCAGTTTTGGATCTCGTAGTGATTCAAGAGGG
AAGTCTAGCTTCTTCAGTGATCGTGGAAGTGGATCAAGGGGAAGGTTTGATGATCGTGGACGGAGTGATTATGACGGCAT
TGGCAGCCGTGGTGACAGAAGTGGCTTTGGCAAATTTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATCAGATGAAG
ATGATTGGTCAAAACCACTCCCACCAAGTGAACGCTTGGAACAGGAACTCTTTTCTGGAGGCAACACTGGGATTAATTTT
GAGAAATATGATGACATTCCAGTTGAGGCAACAGGCAACAACTGTCCTCCACATATTGAAAGTTTCAGTGATGTTGAGAT
GGGAGAAATTATCATGGGAAACATTGAGCTTACTCGTTATACTCGCCCAACTCCAGTGCAGAAGCACGCTATTCCTATTA
TCAAAGAGAAAAGAGACTTGATGGCTTGTGCCCAAACAGGGTCTGGAAAAACTGCAGCATTTCTCTTGCCCATCTTGAGT
CAGATTTATTCAGATGGTCCAGGCGAGGCTTTGAGGGCCATGAAGGAAAATGGAAGGTATGGGCGCCGCAAACAATACCC
AATCTCCTTGGTATTAGCACCAACGAGAGAGTTGGCAGTACAGATCTACGAGGAAGCCAGAAAATTTTCATACCGATCTA
GAGTTCGTCCTTGCGTGGTTTATGGTGGTGCCGATATTGGTCAGCAGATTCGAGACTTGGAACGTGGATGCCATTTGTTA
GTAGCCACTCCAGGACGTCTAGTGGATATGATGGAAAGAGGAAAGATTGGATTAGACTTTTGCAAATACTTGGTGTTAGA
TGAAGCTGATCGGATGTTGGATATGGGGTTTGAGCCTCAGATTCGTAGAATAGTTGAACAAGATACTATGCCTCCAAAGG
GTGTCCGCCACACTATGATGTTTAGTGCTACTTTTCCTAAGGAAATACAGATGCTGGCTCGTGATTTCTTAGATGAATAT
ATCTTCTTGGCTGTAGGAAGAGTTGGCTCTACCTCTGAAAACATCACACAGAAAGTAGTTTGGGTGGAAGAATCAGACAA
ACGGTCATTTCTGCTTGACCTCCTAAATGCAACAGGCAAGGATTCACTGACCCTAGTGTTTGTGGAGACCAAAAAGGGTG
CAGATTCTCTGGAGGATTTCTTATACCATGAAGGATACGCATGTACCAGTATCCATGGAGACCGTTCTCAGAGGGATAGG
GAAGAGGCCCTTCACCAGTTCCGCTCAGGAAAAAGCCCAATTCTAGTGGCTACAGCAGTAGCAGCAAGAGGACTGGACAT
TTCAAATGTGAAACATGTTATCAATTTTGACTTACCAAGTGATATTGAAGAATACGTACATCGCATTGGTCGTACAGGAC
GTGTAGGAAACCTTGGCCTGGCAACCTCATTCTTTAACGAGAGGAACATAAATATTACTAAGGATTTGTTGGATCTTCTT
GTTGAAGCTAAACAAGAAGTGCCATCTTGGTTAGAAAACATGGCTTATGAACACCACTACAAGGGTAGCAGTCGTGGACG
TTCTAAGAGTAGCAGATTTAGTGGAGGGTTTGGTGCCAGAGACTACCGACAAAGTAGTGGTGCCAGCAGTTCCAGCTTCA
GCAGCAGCCGTGCAAGCAGCAGCCGCAGTGGCGGAGGTGGCCACGGTAGCAGCAGAGGATTCGGTGGAGGT
ATGAGTCATGTGGCGGTGGAAAATGCGCTCGGGCTGGACCAGCAGTTTGCTGGCCTAGACCTGAACTCTTCAGATAATCA
GAGTGGAGGAAGTACAGCCAGCAAAGGGCGCTATATTCCTCCTCATTTAAGGAACCGAGAAGCTACTAAAGGTTTCTACG
ACAAAGACAGTTCAGGGTGGAGTTCTAGCAAAGATAAGGATGCGTATAGCAGTTTTGGATCTCGTAGTGATTCAAGAGGG
AAGTCTAGCTTCTTCAGTGATCGTGGAAGTGGATCAAGGGGAAGGTTTGATGATCGTGGACGGAGTGATTATGACGGCAT
TGGCAGCCGTGGTGACAGAAGTGGCTTTGGCAAATTTGAACGTGGTGGAAACAGTCGCTGGTGTGACAAATCAGATGAAG
ATGATTGGTCAAAACCACTCCCACCAAGTGAACGCTTGGAACAGGAACTCTTTTCTGGAGGCAACACTGGGATTAATTTT
GAGAAATATGATGACATTCCAGTTGAGGCAACAGGCAACAACTGTCCTCCACATATTGAAAGTTTCAGTGATGTTGAGAT
GGGAGAAATTATCATGGGAAACATTGAGCTTACTCGTTATACTCGCCCAACTCCAGTGCAGAAGCACGCTATTCCTATTA
TCAAAGAGAAAAGAGACTTGATGGCTTGTGCCCAAACAGGGTCTGGAAAAACTGCAGCATTTCTCTTGCCCATCTTGAGT
CAGATTTATTCAGATGGTCCAGGCGAGGCTTTGAGGGCCATGAAGGAAAATGGAAGGTATGGGCGCCGCAAACAATACCC
AATCTCCTTGGTATTAGCACCAACGAGAGAGTTGGCAGTACAGATCTACGAGGAAGCCAGAAAATTTTCATACCGATCTA
GAGTTCGTCCTTGCGTGGTTTATGGTGGTGCCGATATTGGTCAGCAGATTCGAGACTTGGAACGTGGATGCCATTTGTTA
GTAGCCACTCCAGGACGTCTAGTGGATATGATGGAAAGAGGAAAGATTGGATTAGACTTTTGCAAATACTTGGTGTTAGA
TGAAGCTGATCGGATGTTGGATATGGGGTTTGAGCCTCAGATTCGTAGAATAGTTGAACAAGATACTATGCCTCCAAAGG
GTGTCCGCCACACTATGATGTTTAGTGCTACTTTTCCTAAGGAAATACAGATGCTGGCTCGTGATTTCTTAGATGAATAT
ATCTTCTTGGCTGTAGGAAGAGTTGGCTCTACCTCTGAAAACATCACACAGAAAGTAGTTTGGGTGGAAGAATCAGACAA
ACGGTCATTTCTGCTTGACCTCCTAAATGCAACAGGCAAGGATTCACTGACCCTAGTGTTTGTGGAGACCAAAAAGGGTG
CAGATTCTCTGGAGGATTTCTTATACCATGAAGGATACGCATGTACCAGTATCCATGGAGACCGTTCTCAGAGGGATAGG
GAAGAGGCCCTTCACCAGTTCCGCTCAGGAAAAAGCCCAATTCTAGTGGCTACAGCAGTAGCAGCAAGAGGACTGGACAT
TTCAAATGTGAAACATGTTATCAATTTTGACTTACCAAGTGATATTGAAGAATACGTACATCGCATTGGTCGTACAGGAC
GTGTAGGAAACCTTGGCCTGGCAACCTCATTCTTTAACGAGAGGAACATAAATATTACTAAGGATTTGTTGGATCTTCTT
GTTGAAGCTAAACAAGAAGTGCCATCTTGGTTAGAAAACATGGCTTATGAACACCACTACAAGGGTAGCAGTCGTGGACG
TTCTAAGAGTAGCAGATTTAGTGGAGGGTTTGGTGCCAGAGACTACCGACAAAGTAGTGGTGCCAGCAGTTCCAGCTTCA
GCAGCAGCCGTGCAAGCAGCAGCCGCAGTGGCGGAGGTGGCCACGGTAGCAGCAGAGGATTCGGTGGAGGT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 78 .93 RPM |
| SRP007412_brain | 157 .99 RPM |
| SRP007412_cerebellum | 162 .99 RPM |
| SRP007412_heart | 100 .99 RPM |
| SRP007412_kidney | 139 .43 RPM |
| SRP007412_liver | 61 .71 RPM |
| SRP007412_testis | 532 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000035907 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009050 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000013557 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000009901 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000215301 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000000787 | ortholog_one2many | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000011274 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020257 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000023383 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1898 | 77.95 | 68.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_2504 | 74.39 | 57.14 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000017569 retrocopies