Parental gene:

DDX3X, ENSECAG00000009901

Aliases:None
Description:DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked [Source:HGNC Symbol;Acc:2745]
Organism:Horse (Equus caballus)
Coordinates:X:33503943..33516103(+)


>ENSECAG00000009901
TTTGCTGGCCTAGACCTGAACTCTTCAGATAATCAGAGTGGAGGAAGTACAGCCAGCAAAGGGCGTTATATTCCTCCTCA
CTTAAGGAACAGAGAAGCTACTAAAGGATTCTACGATAAAGACAGTTCAGGTTGGAGTTCTAGTAAGGATAAGGATGCGT
ACAGCAGTTTTGGATCTCGTAGTGATTCAAGAGGGAAGTCTAGTTTCTTCAGTGATCGTGGAAGTGGATCAAGGGGAAGG
TTTGATGATCGTGGACGGAGTGACTATGACGGCATTGGCAGCCGTGGTGACAGAAGTGGCTTTGGCAAATATGAACGTGG
TGGAAATAGTCGCTGGTGTGACAAATCAGATGAAGATGATTGGTCAAAACCACTCCCACCAAGTGAACGCTTGGAACAGG
AACTCTTTTCTGGAGGCAACACTGGGATTAACTTTGAGAAGTATGATGACATTCCGGTTGAGGCAACAGGCAACAACTGT
CCTCCCCACATTGAAAGTTTCAGTGATGTTGAGATGGGAGAAATTATTATGGGAAACATTGAGCTTACTCGTTATACTCG
CCCAACTCCAGTGCAAAAGCATGCTATTCCTATTATCAAAGAGAAAAGAGACTTGATGGCTTGTGCCCAAACAGGGTCTG
GAAAAACTGCAGCATTTCTCTTGCCCATCTTGAGTCAGATTTATTCAGATGGTCCAGGCGAGGCTTTGAGGGCCATGAAG
GAAAATGGAAGGTATGGGCGCCGCAAACAATACCCAATCTCCTTGGTATTAGCACCAACTAGAGAACTGGCAGTACAGAT
CTATGAGGAAGCCAGGAAATTTTCATACCGATCTAGAGTTCGTCCTTGCGTGGTTTATGGTGGTGCTGATATCGGTCAGC
AAATTCGAGACTTAGAACGTGGATGCCACCTGCTAGTAGCCACTCCAGGACGTCTAGTGGATATGATGGAGAGGGGAAAG
ATTGGATTAGACTTCTGCAAATACTTGGTGTTAGATGAAGCTGATCGGATGTTGGATATGGGGTTTGAACCTCAGATACG
TAGAATAGTTGAACAAGATACTATGCCACCAAAGGGAGTTCGCCACACTATGATGTTTAGTGCTACTTTCCCTAAGGAAA
TACAGATGCTTGCTCGTGATTTCTTGGATGAATACATCTTTTTGGCCGTAGGAAGAGTTGGCTCTACCTCTGAGAATATC
ACACAGAAAGTAGTTTGGGTGGAAGAGTCAGACAAACGGTCATTTCTGCTTGACCTTCTAAATGCAACAGGCAAGGATTC
ACTGACCTTAGTGTTTGTGGAGACCAAAAAGGGTGCAGATTCTCTGGAGGATTTCTTATACCATGAAGGATATGCTTGTA
CCAGTATCCATGGAGACCGATCTCAGAGAGACAGAGAGGAGGCCCTTCACCAATTCCGCTCAGGAAAAAGCCCAATTCTA
GTGGCTACAGCAGTAGCAGCAAGAGGACTGGACATTTCAAATGTGAAACATGTTATCAATTTTGACTTACCAAGTGATAT
TGAAGAATATGTACATCGCATTGGCCGTACAGGACGTGTAGGAAACCTTGGTCTTGCCACCTCATTCTTTAATGAGAGGA
ACATAAATATTACCAAGGATTTGTTGGATCTTCTTGTTGAAGCTAAGCAAGAAGTGCCATCTTGGTTAGAAAACATGGCT
TATGAACACCACTACAAGGGTAGCAGTCGTGGACGATCTAAGAGCAGTAGATTCAGCGGAGGATTTGGTGCCAGAGACTA
TCGACAAAGTAGTGGTGCCAGCAGTTCCAGCTTCAGCAGCAGCCGCGCAAGCAGCAGCCGCAGTGGTGGAGGTGGCCATG
GCAGCAGCAGAGGATTTGGTGGAGGTGGCTATGGAGGCTTTTACAACAGCGATGGATATGGAGGAAATTATAACTCCCAG
GGGGTTGACTGGTGGGGTAACTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 152 .52 RPM
SRP021940_embryo 237 .75 RPM
SRP021940_cerebellum 134 .35 RPM
SRP021940_testis 87 .99 RPM
SRP021940_placental_villous 377 .29 RPM
SRP021940_articular_cartilage 217 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000035907 ortholog_one2one 1 retrogene
retro_btau_1846,
Callithrix jacchus ENSCJAG00000009050 ortholog_one2many 2 retrogenes
retro_cjac_1428, retro_cjac_4062,
Cavia porcellus ENSCPOG00000013557 ortholog_one2one 2 retrogenes
retro_cpor_326, retro_cpor_53,
Homo sapiens ENSG00000215301 ortholog_one2one 1 retrogene
retro_hsap_4709,
Macaca mulatta ENSMMUG00000017569 ortholog_one2one 2 retrogenes
retro_mmul_1898, retro_mmul_2504,
Mus musculus ENSMUSG00000000787 ortholog_one2many 1 retrogene
retro_mmus_205,
Ornithorhynchus anatinus ENSOANG00000011274 ortholog_one2one 1 retrogene
retro_oana_64,
Pongo abelii ENSPPYG00000020257 ortholog_one2one 1 retrogene
retro_pabe_3657,
Rattus norvegicus ENSRNOG00000023383 ortholog_one2many 1 retrogene
retro_rnor_1415,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_413 70.49 62.29
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Download FASTA sequences of all ENSECAG00000009901 retrocopies