Parental gene:

EEF1G, ENSLACG00000014700

Aliases:None
Description:eukaryotic translation elongation factor 1 gamma [Source:HGNC Symbol;Acc:3213]
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH126593.1:1080609..1102629(+)


>ENSLACG00000014700
ATGTTGAAAGGGAGTTTCTTTACTCTCTACACTTACCCTGAAAACTGGAGGGCGTTCAAGGCCCTGATCGCCGCGCAGTA
CAGCGGCGCCACAGTCAAGGTTCAGTCTACCCCTCCGCAGTTCCATTTCGGGCAGAGCAACAAGACCCCGGAATTCCTCC
AGAAGTTCCCACTTGGCAAGGTTCCTGCCTTTGAGGGAGACGATGGATTCTGCGTGTTTGAGAGCAACGCCATTGCTCAT
TATGTGAGTAACGATGAACTGCGCGGCTCCAGCAAGGTTGCAGCGGCTCAGGTTATCCAGTGGATGAGCTTTGCGGACAG
TGAGATCGTCCCCCCTGCCAGCACCTGGGTCTTCCCCACCCTCGGCATCATGCAGTACAACAAGCAGGCGACGGAGCACG
CCAAGGAGGAAGTGAAGAAGGTCCTGGGCGTTCTGGATTTGCACCTGCAGACTCGCACCTTCCTGGTGGGAGAGCGTGTC
ACCCTAGCGGATATCGCGGTCGTCTGCTCGCTGCTGTGGCTCTACAAACAGGTTCTGGAACCTTCCTTCCGTCAGCTGTA
CGTCAATGTTAATCGATGGTTTGTGACCTGTGTGAACCAGCCCCAGTTTAAGGCTGTCCTCGGGGAGGTGAAACTCTGTG
AGAAAATGGCCCAGTTTGATGCCAAGAAGTTTGCAGAACTGCAGCCCAAGAAGGAGGCCCCCAAGAAGGAGAAGTCCACC
AAGGAGCAGAAGCAGCAGGAAAAGAAACAGGACAAGAAAAAGGAGGAGAAGAAAGCCACCGCCGAGGAGGAGATGGATGA
AAGCGACCAGGCAATTGCCGCGGAGCCCAAACCCAAGGACCCCTTCGCCCACCTGCCCAAGAGTTCATTTATCATGGATG
AGTTTAAGAGGAAGTACTCCAACGAGGACACCCTGACGGTAGCTCTGCCTTACTTCTGGGAACACTTTGATAAAGAGGGC
TGGTCCATTTGGTACGGAGAGTATAAATACCCCGATGAACTCACTCAAACCTTCATGAGCTGTAACCTTATCTCAGGTAT
GTTCCAGCGTCTCGATAAGCTGCGCAAGACTGGTTTCGCCAGCGTTATTCTCTTCGGTTCCAACAACGACAGCTCTATCT
CTGGAATCTGGGTCTTCCGTGGGCAGGATCTCGCTTTTGAGCTGAGTCTTGATTGGCAGGTGGATTACGAGTCCTACAGC
TGGCACAAACTCGATGTGGACAGTGAGGAGTGCAAGACGATGGTTAAGGAATACTTCGCCTGGGAAGGAGAGTTCAAACA
TGTCGGCAAACCCTTCAACCAAGGCAAAATCTTCAAGTAA

Library Parental gene expression (RPM)
DRP000627_pectoral_fin 926 .43 RPM
DRP000627_kidney 925 .38 RPM
DRP000627_pelvic_fin 1090 .04 RPM
DRP000627_pharynx 857 .86 RPM
DRP000627_gill 836 .16 RPM
DRP000627_tail_muscle 656 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006745 ortholog_one2one 1 retrogene
retro_amel_772,
Bos taurus ENSBTAG00000011843 ortholog_one2one 1 retrogene
retro_btau_1600,
Canis familiaris ENSCAFG00000015834 ortholog_one2many 6 retrogenes
retro_cfam_1241, retro_cfam_1398, retro_cfam_1862, retro_cfam_478, retro_cfam_638, retro_cfam_653,
Callithrix jacchus ENSCJAG00000018949 ortholog_one2many 6 retrogenes
retro_cjac_1464, retro_cjac_1770, retro_cjac_1942, retro_cjac_3147, retro_cjac_841, retro_cjac_874,
Equus caballus ENSECAG00000014334 ortholog_one2one 1 retrogene
retro_ecab_419,
Erinaceus europaeus ENSEEUG00000001231 ortholog_one2one 1 retrogene
retro_eeur_575,
Homo sapiens ENSG00000254772 ortholog_one2one 4 retrogenes
retro_hsap_2778, retro_hsap_2982, retro_hsap_3906, retro_hsap_4744,
Gorilla gorilla ENSGGOG00000013557 ortholog_one2one 12 retrogenes
retro_ggor_1935, retro_ggor_1936, retro_ggor_1991, retro_ggor_1992, retro_ggor_2064, retro_ggor_2065, retro_ggor_2214, retro_ggor_243, retro_ggor_2542, retro_ggor_2633, retro_ggor_2946, retro_ggor_2947,
Loxodonta africana ENSLAFG00000003339 ortholog_one2one 1 retrogene
retro_lafr_381,
Myotis lucifugus ENSMLUG00000000342 ortholog_one2one 1 retrogene
retro_mluc_1110,
Macaca mulatta ENSMMUG00000006598 ortholog_one2one 5 retrogenes
retro_mmul_1447, retro_mmul_1905, retro_mmul_2528, retro_mmul_736, retro_mmul_802,
Monodelphis domestica ENSMODG00000007691 ortholog_one2many 1 retrogene
retro_mdom_68,
Mustela putorius furo ENSMPUG00000013942 ortholog_one2one 2 retrogenes
retro_mputfur_427, retro_mputfur_944,
Mus musculus ENSMUSG00000071644 ortholog_one2one 7 retrogenes
retro_mmus_1447, retro_mmus_1839, retro_mmus_2350, retro_mmus_2765, retro_mmus_3080, retro_mmus_425, retro_mmus_989,
Nomascus leucogenys ENSNLEG00000003528 ortholog_one2many 2 retrogenes
retro_nleu_1510, retro_nleu_681,
Oryctolagus cuniculus ENSOCUG00000020959 ortholog_one2many 3 retrogenes
retro_ocun_1693, retro_ocun_369, retro_ocun_693,
Otolemur garnettii ENSOGAG00000000827 ortholog_one2one 1 retrogene
retro_ogar_1344,
Ochotona princeps ENSOPRG00000014563 ortholog_one2one 1 retrogene
retro_opri_814,
Pongo abelii ENSPPYG00000029434 ortholog_one2one 5 retrogenes
retro_pabe_2237, retro_pabe_2378, retro_pabe_2409, retro_pabe_2473, retro_pabe_3690,
Pan troglodytes ENSPTRG00000003768 ortholog_one2many 3 retrogenes
retro_ptro_1879, retro_ptro_2017, retro_ptro_3159,
Pteropus vampyrus ENSPVAG00000003440 ortholog_one2one 1 retrogene
retro_pvam_1239,
Rattus norvegicus ENSRNOG00000020075 ortholog_one2many 8 retrogenes
retro_rnor_1312, retro_rnor_2126, retro_rnor_2235, retro_rnor_2269, retro_rnor_2468, retro_rnor_2617, retro_rnor_2928, retro_rnor_979,
Sorex araneus ENSSARG00000011232 ortholog_one2one 1 retrogene
retro_sara_718,
Sus scrofa ENSSSCG00000013064 ortholog_one2one 1 retrogene
retro_sscr_164,
Ictidomys tridecemlineatus ENSSTOG00000002851 ortholog_one2many 2 retrogenes
retro_itri_852, retro_itri_886,
Tursiops truncatus ENSTTRG00000002459 ortholog_one2one 3 retrogenes
retro_ttru_1082, retro_ttru_1544, retro_ttru_1603,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_82 96.02 51.60
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Download FASTA sequences of all ENSLACG00000014700 retrocopies