Parental gene:

EEF1G, ENSSSCG00000013064

Aliases:EEF1G, eEF-1 gamma
Description:Elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:Q29387]
Organism:Pig (Sus scrofa)
Coordinates:2:8507885..8518300(+)


>ENSSSCG00000013064
ATGGCGGCCGGGACCCTGTACACATATCCTGAAAACTGGAGGGCCTTCAAAGCCCTCATTGCCGCTCAGTACAGCGGGGC
TCAGGTCCGCGTGCTCTCCGCACCACCCCACTTCCATTTTGGCCAAACCAACCACACCCCCGAATTTCTCCGTAAATTTC
CTGCCGGTAAGGTTCCAGCATTTGAGGGTGACGATGGATTCTGTGTGTTCGAGAGCAATGCCATTGCCTACTACGTGAGC
AACGAGGAGCTGCGGGGAAGTACTCCTGAGGCAGCAGCCCAGGTGGTGCAGTGGGTGAGCTTTGCCGATAGCGACATCGT
GCCCCCCGCCAGTACCTGGGTGTTCCCCACCTTGGGCATCATGCACTACAACAAGCAGCAACAGGCCACAGAGAATGCAA
AGGATGAGGTGAGGCGAGTTCTGGGGCTGCTGGATGCTCACTTGAAGACGAGGACTTTTCTGGTGGGCGAACGTGTGACG
CTGGCTGACATCACAGTTGTCTGCACCCTGTTGTGGCTCTACAAACAGGTCCTGGAGCCTTCTTTCCGCCAGGCCTTCCC
CAATACCAACCGCTGGTTCCTCACCTGCATTAACCAGCCCCAGTTCCGGGCTGTCTTGGGGGAGGTGAAGCTCTGTGAGA
AGATGGCCCAGTTTGATGCTAAAAAGTTTGCAGAGAGTCAGCCTAAAAAGGACACCCCACGGAAAGAGAAAGGTTCTCGA
GAAGAGAAGCAGAAGCCCCAGGCTGAGCGGAAAGAGGAGAAGAAGGCAGCTGCTCCTGCTCCTGAGGAGGAGCTGGACGA
GTGTGAGCAGGCGCTGGCTGCTGAGCCCAAGGCCAAGGATCCCTTTGCTCACCTACCCAAGAGTACCTTTGTGTTGGACG
AATTTAAGCGCAAGTACTCCAACGAGGACACACTCTCTGTGGCGCTGCCGTACTTCTGGGAGCACTTTGATAAGGATGGC
TGGTCCTTGTGGTACTCGGAGTACCGCTTCCCTGAAGAGCTCACCCAGACCTTCATGAGCTGCAACCTCATCACTGGAAT
GTTCCAGCGATTGGACAAGCTGAGGAAGAATGCCTTTGCCAGTGTCATTCTCTTTGGAACCAACAACAGCAGCTCCATTT
CTGGAGTCTGGGTCTTCCGAGGCCAGGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTACGAGTCATACACG
TGGCGGAAACTGGATCCTGGCAGCGAGGAGACCCAGACGCTGGTTCGAGAATACTTTTCCTGGGAGGGGGCCTACCAGCA
TGTGGGCAAAGCCTTCAATCAGGGCAAGATCTTCAAGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 859 .83 RPM
SRP014902_testis 1265 .24 RPM
SRP018856_adipose 1150 .90 RPM
SRP018288_kidney 450 .86 RPM
SRP018288_lung 580 .82 RPM
SRP018288_liver 345 .40 RPM
SRP018288_heart 1126 .90 RPM
SRP035408_liver 489 .63 RPM
SRP035408_brain 404 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011843 ortholog_one2one 1 retrogene
retro_btau_1600,
Canis familiaris ENSCAFG00000015834 possible_ortholog 6 retrogenes
retro_cfam_1241, retro_cfam_1398, retro_cfam_1862, retro_cfam_478, retro_cfam_638, retro_cfam_653,
Callithrix jacchus ENSCJAG00000018949 possible_ortholog 6 retrogenes
retro_cjac_1464, retro_cjac_1770, retro_cjac_1942, retro_cjac_3147, retro_cjac_841, retro_cjac_874,
Latimeria chalumnae ENSLACG00000014700 ortholog_one2one 1 retrogene
retro_lcha_82,
Myotis lucifugus ENSMLUG00000000342 ortholog_one2one 1 retrogene
retro_mluc_1110,
Monodelphis domestica ENSMODG00000007691 possible_ortholog 1 retrogene
retro_mdom_68,
Nomascus leucogenys ENSNLEG00000003528 possible_ortholog 2 retrogenes
retro_nleu_1510, retro_nleu_681,
Otolemur garnettii ENSOGAG00000000827 ortholog_one2one 1 retrogene
retro_ogar_1344,
Ochotona princeps ENSOPRG00000014563 ortholog_one2one 1 retrogene
retro_opri_814,
Pan troglodytes ENSPTRG00000003768 possible_ortholog 3 retrogenes
retro_ptro_1879, retro_ptro_2017, retro_ptro_3159,
Pteropus vampyrus ENSPVAG00000003440 ortholog_one2one 1 retrogene
retro_pvam_1239,
Rattus norvegicus ENSRNOG00000020075 possible_ortholog 8 retrogenes
retro_rnor_1312, retro_rnor_2126, retro_rnor_2235, retro_rnor_2269, retro_rnor_2468, retro_rnor_2617, retro_rnor_2928, retro_rnor_979,
Tursiops truncatus ENSTTRG00000002459 ortholog_one2one 3 retrogenes
retro_ttru_1082, retro_ttru_1544, retro_ttru_1603,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_164 85.00 100.00
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Download FASTA sequences of all ENSSSCG00000013064 retrocopies