Parental gene: | EEF1G, ENSOCUG00000020959 |
| Aliases: | None |
| Description: | eukaryotic translation elongation factor 1 gamma (EEF1G), mRNA [Source:RefSeq mRNA;Acc:NM_001101703] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | GL018717:1747650..1758871(+) |
>ENSOCUG00000020959
ATGGCGGCCGGGACCCTGTACACATACCCTGAAAACTGGAGGGCCTTTAAGGCCCTCATCGCTGCTCAGTACAGCGGGGC
TCAGGTCCGCGTGCTCTCCGCACCCCCCCACTTCCACTTCGGCCAGACCAACCGAACCCCTGAATTTCTCCGCAAATTCC
CTGCTGGCAAGGTTCCAGCATTTGAAGGTGATGATGGATTCTGTGTGTTTGAGAGCAACGCCATTGCCTACTATGTGAGC
AATGAGGAGCTGCGGGGAAGTACTCCAGAGGCGGCCGCCCAGGTGGTGCAGTGGGTGAGCTTTGCCGATAGTGACATAGT
GCCCCCAGCCAGCACTTGGGTGTTCCCCACCTTGGGCATCATGCATCACAACAAGCAGGCCACTGAGAATGCAAAGGAAG
AGGTGAAGCGGATTCTGGGGCTGCTGGATGCTCACTTGAAGACGAGGACTTTCCTGGTGGGCGAGCGAGTGACACTGGCT
GACATCACAGTTGTCTGCACCCTTTTGTGGCTCTATAAACAGGTCTTGGAACCTTCTTTCCGTCAGGCTTTTCCGAATAC
CAACCGCTGGTTCCTCACCTGCATTAATCAGCCCCAGTTTCGGGCTGTCTTGGGGGAGGTGAAACTGTGTGAGAAGATGG
CCCAGTTTGATGCTAAAAAGTTTGCAGAGAGCCAGCCTAAAAAGGACACTCCACGGAAAGAGAAAGGCTCACGGGAGGAG
AAGCAGAAGCCCCAGGCTGAGCGGAAAGAGGAGAAAAAGGCAGCTGCCCCAGCTCCTGAGGAAGAGATGGACGAATGCGA
GCAGGCACTGGCTGCTGAGCCCAAGGCAAAGGACCCCTTTGCCCACCTGCCCAAAAGTACCTTTGTGTTGGATGAGTTTA
AGCGCAAGTACTCCAATGAGGACACTCTCTCTGTGGCGCTGCCATATTTTTGGGAGCACTTTGACAAGGATGGCTGGTCT
CTGTGGTATGCTGAGTACCGTTTCCCTGAGGAGCTCACGCAGACTTTCATGAGTTGCAACCTCATCACTGGAATGTTCCA
GCGGTTGGATAAGCTGAGGAAGAATGCCTTTGCCAGTGTCATCCTCTTTGGAACCAACAATAGCAGCTCCATTTCTGGAA
TCTGGGTCTTCCGAGGCCAAGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTACGAGTCGTATACGTGGAGG
AAACTG
ATGGCGGCCGGGACCCTGTACACATACCCTGAAAACTGGAGGGCCTTTAAGGCCCTCATCGCTGCTCAGTACAGCGGGGC
TCAGGTCCGCGTGCTCTCCGCACCCCCCCACTTCCACTTCGGCCAGACCAACCGAACCCCTGAATTTCTCCGCAAATTCC
CTGCTGGCAAGGTTCCAGCATTTGAAGGTGATGATGGATTCTGTGTGTTTGAGAGCAACGCCATTGCCTACTATGTGAGC
AATGAGGAGCTGCGGGGAAGTACTCCAGAGGCGGCCGCCCAGGTGGTGCAGTGGGTGAGCTTTGCCGATAGTGACATAGT
GCCCCCAGCCAGCACTTGGGTGTTCCCCACCTTGGGCATCATGCATCACAACAAGCAGGCCACTGAGAATGCAAAGGAAG
AGGTGAAGCGGATTCTGGGGCTGCTGGATGCTCACTTGAAGACGAGGACTTTCCTGGTGGGCGAGCGAGTGACACTGGCT
GACATCACAGTTGTCTGCACCCTTTTGTGGCTCTATAAACAGGTCTTGGAACCTTCTTTCCGTCAGGCTTTTCCGAATAC
CAACCGCTGGTTCCTCACCTGCATTAATCAGCCCCAGTTTCGGGCTGTCTTGGGGGAGGTGAAACTGTGTGAGAAGATGG
CCCAGTTTGATGCTAAAAAGTTTGCAGAGAGCCAGCCTAAAAAGGACACTCCACGGAAAGAGAAAGGCTCACGGGAGGAG
AAGCAGAAGCCCCAGGCTGAGCGGAAAGAGGAGAAAAAGGCAGCTGCCCCAGCTCCTGAGGAAGAGATGGACGAATGCGA
GCAGGCACTGGCTGCTGAGCCCAAGGCAAAGGACCCCTTTGCCCACCTGCCCAAAAGTACCTTTGTGTTGGATGAGTTTA
AGCGCAAGTACTCCAATGAGGACACTCTCTCTGTGGCGCTGCCATATTTTTGGGAGCACTTTGACAAGGATGGCTGGTCT
CTGTGGTATGCTGAGTACCGTTTCCCTGAGGAGCTCACGCAGACTTTCATGAGTTGCAACCTCATCACTGGAATGTTCCA
GCGGTTGGATAAGCTGAGGAAGAATGCCTTTGCCAGTGTCATCCTCTTTGGAACCAACAATAGCAGCTCCATTTCTGGAA
TCTGGGTCTTCCGAGGCCAAGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTACGAGTCGTATACGTGGAGG
AAACTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 53 .41 RPM |
| SRP017611_kidney | 215 .69 RPM |
| SRP017611_brain | 128 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006745 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000015834 | ortholog_one2many | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018949 | ortholog_one2one | 6 retrogenes | |
| Equus caballus | ENSECAG00000014334 | ortholog_one2one | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000014700 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003339 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007691 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013942 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003528 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000029434 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000003768 | possible_ortholog | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000020075 | possible_ortholog | 8 retrogenes | |
| Sorex araneus | ENSSARG00000011232 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_369 | 92.66 | 64.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_693 | 99.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_1693 | 95.35 | 74.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000020959 retrocopies