Parental gene: | Eef1g, ENSMUSG00000071644 |
| Aliases: | Eef1g, 2610301D06Rik, AA407312, EF1G |
| Description: | eukaryotic translation elongation factor 1 gamma [Source:MGI Symbol;Acc:MGI:1914410] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 19:8967040..8978479(+) |
>ENSMUSG00000071644
ATGGCGGCTGGGACCCTGTACACATACCCTGAAAATTGGAGGGCCTTCAAGGCCCTCATCGCTGCTCAGTACAGCGGGGC
TCAGGTCCGCGTGCTCTCCGCACCACCCCACTTCCACTTTGGCCAAACCAACCGCACCCCTGAATTTCTCCGAAAATTTC
CTGCCGGCAAGGTTCCAGCATTTGAGGGTGATGATGGATTCTGTGTGTTTGAGAGCAATGCCATTGCCTATTATGTAAGC
AATGAGGAGCTGCGAGGAAGTACGCCAGAGGCGGCAGCTCAGGTGGTGCAGTGGGTCAGCTTTGCTGACAGTGACATCGT
TCCTCCAGCTAGTACCTGGGTGTTCCCCACCTTGGGCATTATGCACCACAACAAACAGGCCACTGAAAATGCGAAAGAGG
AGGTGAAGCGAATCCTGGGGCTGCTGGACACTCACTTGAAGACTCGAACTTTTCTAGTGGGCGAGCGAGTGACACTGGCT
GATATTACAGTTGTCTGTACCCTGTTGTGGCTCTATAAACAGGTCTTAGAGCCTTCTTTTCGCCAGGCCTTCCCCAATAC
CAACCGGTGGTTCCTTACCTGCATTAACCAGCCCCAGTTCAGGGCTATCTTGGGGGAGGTGAAGCTGTGTGAGAAGATGG
CTCAGTTTGATGCTAAGAAGTTTGCAGAGAGCCAGCCTAAAAAAGATACCCCAAGGAAAGAAAAGGGTTCACGAGAGGAG
AAACAGAAACCCCAGGCTGAGCGGAAGGAGGAAAAAAAGGCAGCTGCCCCAGCTCCTGAGGAAGAGATGGATGAGTGTGA
GCAGGCATTGGCTGCTGAGCCCAAGGCCAAGGACCCTTTCGCTCACCTGCCCAAGAGTACCTTTGTGTTGGATGAGTTTA
AGCGTAAGTACTCCAATGAGGACACCCTCTCTGTGGCACTGCCATATTTTTGGGAGCACTTTGATAAAGATGGCTGGTCC
CTGTGGTATGCCGAGTACCGCTTCCCTGAAGAGCTGACCCAGACCTTCATGAGTTGCAACCTCATCACTGGGATGTTTCA
GCGATTGGACAAACTGAGGAAGAATGCCTTTGCTAGTGTTATCCTCTTTGGAACCAACAACAGCAGCTCCATTTCTGGTG
TTTGGGTCTTCCGAGGCCAAGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTATGAGTCGTATACATGGCGG
AAACTGGATCCTGGGAGCGAGGAAACCCAGACCCTGGTTCGAGAGTACTTTTCCTGGGAGGGGACCTTCCAGCATGTGGG
CAAAGCCGTCAATCAAGGCAAGATCTTCAAGTGA
ATGGCGGCTGGGACCCTGTACACATACCCTGAAAATTGGAGGGCCTTCAAGGCCCTCATCGCTGCTCAGTACAGCGGGGC
TCAGGTCCGCGTGCTCTCCGCACCACCCCACTTCCACTTTGGCCAAACCAACCGCACCCCTGAATTTCTCCGAAAATTTC
CTGCCGGCAAGGTTCCAGCATTTGAGGGTGATGATGGATTCTGTGTGTTTGAGAGCAATGCCATTGCCTATTATGTAAGC
AATGAGGAGCTGCGAGGAAGTACGCCAGAGGCGGCAGCTCAGGTGGTGCAGTGGGTCAGCTTTGCTGACAGTGACATCGT
TCCTCCAGCTAGTACCTGGGTGTTCCCCACCTTGGGCATTATGCACCACAACAAACAGGCCACTGAAAATGCGAAAGAGG
AGGTGAAGCGAATCCTGGGGCTGCTGGACACTCACTTGAAGACTCGAACTTTTCTAGTGGGCGAGCGAGTGACACTGGCT
GATATTACAGTTGTCTGTACCCTGTTGTGGCTCTATAAACAGGTCTTAGAGCCTTCTTTTCGCCAGGCCTTCCCCAATAC
CAACCGGTGGTTCCTTACCTGCATTAACCAGCCCCAGTTCAGGGCTATCTTGGGGGAGGTGAAGCTGTGTGAGAAGATGG
CTCAGTTTGATGCTAAGAAGTTTGCAGAGAGCCAGCCTAAAAAAGATACCCCAAGGAAAGAAAAGGGTTCACGAGAGGAG
AAACAGAAACCCCAGGCTGAGCGGAAGGAGGAAAAAAAGGCAGCTGCCCCAGCTCCTGAGGAAGAGATGGATGAGTGTGA
GCAGGCATTGGCTGCTGAGCCCAAGGCCAAGGACCCTTTCGCTCACCTGCCCAAGAGTACCTTTGTGTTGGATGAGTTTA
AGCGTAAGTACTCCAATGAGGACACCCTCTCTGTGGCACTGCCATATTTTTGGGAGCACTTTGATAAAGATGGCTGGTCC
CTGTGGTATGCCGAGTACCGCTTCCCTGAAGAGCTGACCCAGACCTTCATGAGTTGCAACCTCATCACTGGGATGTTTCA
GCGATTGGACAAACTGAGGAAGAATGCCTTTGCTAGTGTTATCCTCTTTGGAACCAACAACAGCAGCTCCATTTCTGGTG
TTTGGGTCTTCCGAGGCCAAGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTATGAGTCGTATACATGGCGG
AAACTGGATCCTGGGAGCGAGGAAACCCAGACCCTGGTTCGAGAGTACTTTTCCTGGGAGGGGACCTTCCAGCATGTGGG
CAAAGCCGTCAATCAAGGCAAGATCTTCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 74 .27 RPM |
| SRP007412_cerebellum | 52 .71 RPM |
| SRP007412_heart | 74 .28 RPM |
| SRP007412_kidney | 74 .94 RPM |
| SRP007412_liver | 53 .74 RPM |
| SRP007412_testis | 179 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015834 | possible_ortholog | 6 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000001231 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000254772 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013557 | ortholog_one2one | 12 retrogenes | |
| Latimeria chalumnae | ENSLACG00000014700 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003339 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006598 | ortholog_one2one | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000007691 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003528 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000003768 | ortholog_one2many | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000020075 | ortholog_one2one | 8 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000002851 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_425 | 96.57 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_989 | 75.00 | 53.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1447 | 90.43 | 68.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_1839 | 95.10 | 70.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_2350 | 77.24 | 61.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_2765 | 83.64 | 60.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_3080 | 99.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000071644 retrocopies