Parental gene:

PTBP1, ENSGGOG00000005090

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:19:752054..767073(+)


>ENSGGOG00000005090
ATGGACGGCATTGTCCCAGATATAGCCGTTGGTACAAAGCGGGGATCTGACGAGCTTTTCTCTACTTGTGTCACTAACGG
ACCGTTTATCATGAGCAGCAACTCGGCCTCTGCAGCAAATGGAAATGACAGCAAGAAGTTCAAAGGTGACAGCCGAAGCG
CAGGCGTCCCCTCTAGAGTGATCCACATCCGGAAGCTCCCCATCGACGTCACAGAGGGCGAAGTCATCTCCCTGGGGCTG
CCCTTTGGGAAGGTCACCAACCTCCTGATGCTGAAGGGGAAAAACCAGGCCTTCATCGAGATGAACACGGAGGAGGCTGC
CAACACCATGGTGAACTACTACACCTCGGTGACCCCTGTGCTGCGCGGCCAGCCCATCTACATCCAGTTCTCCAACCACA
AGGAGCTGAAGACCGACAGCTCTCCCAACCAGGCGCGGGCCCAGGCGGCCCTGCAGGCGGTGAACTCGGTCCAGTCGGGG
AACCTGGCCTTGGCTGCCTCGGCGGCGGCCGTGGACGCAGGGATGGCGATGGCCGGGCAGAGCCCCGTGCTCAGGATCAT
CGTGGAGAACCTCTTCTACCCTGTGACCCTGGATGTGCTGCACCAGATTTTCTCCAAGTTCGGCACAGTGTTGAAGATCA
TCACCTTCACCAAGAACAACCAGTTCCAGGCCCTGCTGCAGTATGCGGACCCCGTGAGCGCCCAGCACGCCAAGCTGTCG
CTGGACGGGCAGAACATCTACAACGCCTGCTGCACGCTGCGCATCGACTTTTCCAAGCTCACCAGCCTCAACGTCAAGTA
CAACAATGACAAGAGCCGCGACTACACACGCCCAGACCTGCCTTCCGGGGACAGCCAGCCCTCGCTGGACCAGACCATGG
CCGCGGCCTTCGGTGCACCTGGTATAATCTCAGCCTCTCCGTATGCAGGAGCTGGTTTCCCTCCCACCTTTGCCATTCCT
CAAGCTGCAGGCCTTTCCGTTCCCAACGTCCACGGCGCCCTGGCCCCCCTGGCCATCCCCTCGGCGGCGGCGGCAGCTGC
GGCGGCAGGCCGGATCGCCATCCCGGGCCTGGCGGGGGCAGGAAATTCTGTATTGCTGGTCAGCAACCTCAACCCAGAGA
GAGTCACACCCCAAAGCCTCTTTATTCTTTTCGGCGTCTACGGTGACGTGCAGCGCGTGAAGATCCTGTTCANNNNNNNN
NNNNNNNNNNNNNNNGCGCCTGGTCACACGGGTGCTGCTCCCCCAGCCATGAGCCACCTGAACGGGCACAAGCTGCACGG
GAAGCCCATCCGCATCACGCTCTCGAAGCACCAGAACGTGCAGCTGCCCCGCGAGGGCCAGGAGGACCAGGGCCTGACCA
AGGACTACGGCAACTCACCCCTGCACCGCTTCAAGAAGCCCGGCTCCAAGAACTTCCAGAACATATTCCCGCCCTCGGCC
ACGCTGCACCTCTCCAACATCCCGCCCTCAGTCTCCGAGGAGGACCTCAAGGTCCTGTTTTCCAGCAATGGGGGCGTCGT
CAAAGGATTCAAGTTCTTCCAGAAGGACCGCAAGATGGCGCTGATCCAGATGGGCTCCGTGGAGGAGGCGGTCCAGGCCC
TCATTGACCTGCACAACCATGACCTCGGGGAGAACCACCACCTGCGGGTCTCCTTCTCCAAGTCCACCATC

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .02 RPM
SRP007412_cerebellum 22 .06 RPM
SRP007412_heart 18 .61 RPM
SRP007412_kidney 40 .85 RPM
SRP007412_liver 36 .56 RPM
SRP007412_testis 54 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020162 ortholog_one2one 1 retrogene
retro_cjac_1901,
Ciona savignyi ENSCSAVG00000007421 ortholog_one2many 1 retrogene
retro_csav_17,
Equus caballus ENSECAG00000018845 ortholog_one2one 1 retrogene
retro_ecab_330,
Echinops telfairi ENSETEG00000006890 ortholog_one2many 1 retrogene
retro_etel_1573,
Homo sapiens ENSG00000011304 ortholog_one2one 1 retrogene
retro_hsap_1354,
Macropus eugenii ENSMEUG00000006710 ortholog_one2one 2 retrogenes
retro_meug_1447, retro_meug_67,
Myotis lucifugus ENSMLUG00000003320 ortholog_one2one 1 retrogene
retro_mluc_755,
Nomascus leucogenys ENSNLEG00000000864 ortholog_one2one 1 retrogene
retro_nleu_1834,
Pongo abelii ENSPPYG00000009289 ortholog_one2one 1 retrogene
retro_pabe_1122,
Pan troglodytes ENSPTRG00000010165 ortholog_one2one 1 retrogene
retro_ptro_928,
Rattus norvegicus ENSRNOG00000010448 possible_ortholog 2 retrogenes
retro_rnor_1994, retro_rnor_2478,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1054 86.71 53.32
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000005090 retrocopies