Parental gene:

RRM2, ENSCAFG00000003409

Aliases:None
Description:ribonucleotide reductase M2 [Source:HGNC Symbol;Acc:10452]
Organism:Dog (Canis familiaris)
Coordinates:17:7105810..7122747(+)


>ENSCAFG00000003409
ATGCTCTCCGTCCGCGTCCCGCTCGCCACCATCGCGGACCCCCAGCAGCAGCAGCAGCAGCAGCTCCAGCTCTCGCCCCT
CAAGGGGCTCAGCCTGGCGGACAAGGAGAACACGCCCCCGGCCCTCAGCGGCACCCGCGTGCTGGCCAGCAAGACCGCCC
GGAGGATCTTCCAGGAGCCCGCCGAGCCGAAAACTAAGGTACTTGCCCCCAGCGCGGAGGAGGAACCACTGCTGAGAGAA
AACCCCCGTCGCTTTGTCATCTTCCCTATCGAGTACCATGATATTTGGCAGATGTATAAGAAAGCGGAGGCTTCCTTTTG
GACAGCCGAAGAGGTGGATCTTTCCAAGGACATTCAGCACTGGGAATCCCTGAAGCCTGAGGAGAGATATTTTATATCCC
ATGTTCTGGCTTTCTTTGCAGCGAGCGATGGCATAGTAAATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCAGATT
ACGGAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATCCACTCTGAGATGTATAGTCTCCTCATTGACAC
TTATATTAAAGATTCCAAAGAAAGGGAATTTCTCTTCAACGCCATTGAGACGATGCCTTGTGTAAAGAAGAAGGCAGATT
GGGCCTTGCGTTGGATTGGGGACAAAGAAGCTACCTATGGAGAACGGGTTGTGGCCTTTGCTGCCGTGGAAGGAATCTTC
TTTTCGGGTTCTTTTGCGTCAATATTCTGGCTCAAGAAACGGGGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTAT
TAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACACCTGGTCCACAAACCTTCAGAGCAGAGGG
TGAAGGAAATAATTATCAATGCCGTTAGGATAGAACAGGAGTTCCTCACGGAGGCTTTGCCAGTGAAGCTCATTGGGATG
AATTGCACGTTAATGAAGCAGTATATTGAATTCGTGGCAGACCGACTTATGCTGGAGCTCGGTTTTAGCAAGGTTTTCAG
AGTAGAAAATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAAGAGAGTAGGTGGAA
GGCTCTCCACCGGTGATGCTCGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 0 .24 RPM
SRP017611_kidney 4 .69 RPM
SRP017611_liver 0 .22 RPM
SRP012049_cerebellum 16 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006533 ortholog_one2one 3 retrogenes
retro_cjac_2134, retro_cjac_2950, retro_cjac_3851,
Cavia porcellus ENSCPOG00000008652 ortholog_one2many 1 retrogene
retro_cpor_8,
Erinaceus europaeus ENSEEUG00000009755 ortholog_one2one 2 retrogenes
retro_eeur_421, retro_eeur_585,
Echinops telfairi ENSETEG00000015797 ortholog_one2one 2 retrogenes
retro_etel_640, retro_etel_691,
Homo sapiens ENSG00000171848 ortholog_one2one 1 retrogene
retro_hsap_4815,
Macropus eugenii ENSMEUG00000000121 ortholog_one2one 3 retrogenes
retro_meug_1450, retro_meug_199, retro_meug_277,
Microcebus murinus ENSMICG00000012789 ortholog_one2one 1 retrogene
retro_mmur_1384,
Myotis lucifugus ENSMLUG00000010596 ortholog_one2one 1 retrogene
retro_mluc_794,
Macaca mulatta ENSMMUG00000002057 ortholog_one2one 1 retrogene
retro_mmul_2568,
Monodelphis domestica ENSMODG00000014763 ortholog_one2many 1 retrogene
retro_mdom_775,
Mus musculus ENSMUSG00000020649 ortholog_one2one 2 retrogenes
retro_mmus_2472, retro_mmus_3073,
Nomascus leucogenys ENSNLEG00000013733 ortholog_one2one 2 retrogenes
retro_nleu_2190, retro_nleu_3040,
Otolemur garnettii ENSOGAG00000007075 ortholog_one2one 1 retrogene
retro_ogar_2665,
Pongo abelii ENSPPYG00000012656 ortholog_one2one 1 retrogene
retro_pabe_3743,
Rattus norvegicus ENSRNOG00000023272 ortholog_one2many 1 retrogene
retro_rnor_331,
Sus scrofa ENSSSCG00000021742 ortholog_one2many 1 retrogene
retro_sscr_901,
Tursiops truncatus ENSTTRG00000017209 ortholog_one2one 1 retrogene
retro_ttru_603,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2113 75.65 50.13
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Download FASTA sequences of all ENSCAFG00000003409 retrocopies