Parental gene:

ENSACAG00000017933

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:3:134050845..134057531(-)


>ENSACAG00000017933
ATGGGCCGTGTAATCAGAGGTCAAAGAAAAGGTGCAGGATCTGTGTTCAGGGCCCATGTGAAGCACAGAAAGGGTGCAGC
AAAGCTGAGAGCAGTTGACTTTGCTGAAAGACATGGCTACATCAAGGGTATTGTAAAGGATATCATTCATGATCCTGGTC
GAGGAGCTCCTCTGGCCAAGGTTGTTTTCCGTGATCCATACAGATTTAAGAAACGAACAGAATTGTTCATTGCAGCAGAA
GGCATTCATACTGGGCAATTTGTTTATTGTGGCAAGAAAGCTCAACTCAACATTGGCAATGTCCTGCCTGTTGGTACTAT
GCCCGAAGGCACCATTGTCTGCTGCCTTGAAGAGAAGCCTGGAGATCGTGGCAAACTAGCACGTGCTTCTGGAAACTATG
CCACAGTTATCTCCCACAATCCTGAAACCAAAAAAACCAGGGTGAAACTGCCTTCTGGTTCCAAGAAGGTGATCTCCTCT
GCAAACAGAGCAGTTGTCGGTATTGTTGCTGGTGGTGGCCGTATTGACAAGCCAATCTTGAAAGCTGGACGTGCGTACCA
CAAATATAAGGCAAAGAGGAACTGCTGGCCACGAGTTCGGGGTGTAGCTATGAATCCTGTTGAACACCCCTTTGGTGGTG
GAAACCACCAGCATATTGGCAAGCCTTCAACCATCAGGAGGGATGCTCCAGCTGGTCGCAAGGTCGGTCTCATTGCGGCC
CGGCGTACTGGCAGACTGCGTGGAACCAAGACTGTCCAGGAGAAAGAGAATTAA

Library Parental gene expression (RPM)
SRP009831_adrenal 1816 .30 RPM
SRP009831_brain 289 .25 RPM
SRP009831_dewlap 371 .03 RPM
SRP009831_embryo 1047 .71 RPM
SRP009831_heart 853 .31 RPM
SRP009831_liver 852 .36 RPM
SRP009831_lung 514 .76 RPM
SRP009831_ovary 220 .57 RPM
SRP009831_skeletal_muscle 363 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005395 ortholog_one2many 1 retrogene
retro_amel_241,
Bos taurus ENSBTAG00000026327 ortholog_many2many 1 retrogene
retro_btau_96,
Canis familiaris ENSCAFG00000001677 ortholog_one2many 1 retrogene
retro_cfam_1132,
Callithrix jacchus ENSCJAG00000021388 ortholog_many2many 4 retrogenes
retro_cjac_1109, retro_cjac_1169, retro_cjac_1579, retro_cjac_2047,
Cavia porcellus ENSCPOG00000003854 ortholog_one2many 2 retrogenes
retro_cpor_1006, retro_cpor_1415,
Dasypus novemcinctus ENSDNOG00000009300 ortholog_one2many 2 retrogenes
retro_dnov_2505, retro_dnov_503,
Echinops telfairi ENSETEG00000007104 ortholog_one2many 4 retrogenes
retro_etel_1100, retro_etel_264, retro_etel_296, retro_etel_916,
Felis catus ENSFCAG00000026288 ortholog_one2many 1 retrogene
retro_fcat_570,
Homo sapiens ENSG00000161016 ortholog_one2many 1 retrogene
retro_hsap_2851,
Gorilla gorilla ENSGGOG00000008164 ortholog_one2many 1 retrogene
retro_ggor_1974,
Macropus eugenii ENSMEUG00000013824 possible_ortholog 9 retrogenes
retro_meug_1116, retro_meug_1354, retro_meug_1757, retro_meug_1817, retro_meug_1881, retro_meug_670, retro_meug_941, retro_meug_960, retro_meug_974,
Macaca mulatta ENSMMUG00000013379 ortholog_many2many 2 retrogenes
retro_mmul_1470, retro_mmul_1531,
Monodelphis domestica ENSMODG00000004283 possible_ortholog 3 retrogenes
retro_mdom_1055, retro_mdom_1696, retro_mdom_253,
Mustela putorius furo ENSMPUG00000006022 ortholog_many2many 1 retrogene
retro_mputfur_1517,
Mus musculus ENSMUSG00000003970 ortholog_one2many 2 retrogenes
retro_mmus_2004, retro_mmus_2112,
Nomascus leucogenys ENSNLEG00000010952 ortholog_one2many 2 retrogenes
retro_nleu_1603, retro_nleu_594,
Ornithorhynchus anatinus ENSOANG00000002646 possible_ortholog 1 retrogene
retro_oana_93,
Oryctolagus cuniculus ENSOCUG00000024716 ortholog_many2many 1 retrogene
retro_ocun_146,
Pan troglodytes ENSPTRG00000020716 ortholog_one2many 1 retrogene
retro_ptro_1931,
Rattus norvegicus ENSRNOG00000048523 ortholog_many2many 2 retrogenes
retro_rnor_122, retro_rnor_239,
Sarcophilus harrisii ENSSHAG00000013568 possible_ortholog 2 retrogenes
retro_shar_482, retro_shar_558,
Tupaia belangeri ENSTBEG00000010363 ortholog_one2many 2 retrogenes
retro_tbel_2826, retro_tbel_3453,
Tursiops truncatus ENSTTRG00000013858 ortholog_one2many 1 retrogene
retro_ttru_1147,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_31 97.67 100.00
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Download FASTA sequences of all ENSACAG00000017933 retrocopies