Parental gene:

RPL8, ENSCAFG00000001677

Aliases:None
Description:ribosomal protein L8 [Source:HGNC Symbol;Acc:10368]
Organism:Dog (Canis familiaris)
Coordinates:13:38101881..38104785(+)


>ENSCAFG00000001677
ATGGGCCGCGTCATCCGTGGGCAGAGAAAGGGCGCCGGCTCCGTGTTCCGCGCGCACGTGAAGCACCGCAAGGGCGCTGC
GCGTCTGCGCGCCGTGGACTTCGCCGAGCGGCACGGCTACATCAAGGGCATCGTGAAGGACATCATCCACGACCCGGGCC
GCGGGGCACCCCTCGCCAAGGTCGTCTTCCGGGATCCGTACCGGTTTAAGAAGCGGACGGAGCTGTTCATCGCCGCCGAG
GGCATCCACACTGGCCAGTTCGTGTACTGCGGCAAGAAAGCCCAGCTCAACATAGGCAATGTGCTCCCGGTGGGCACTAT
GCCCGAGGGCACCATCGTGTGCTGTCTGGAGGAGAAGCCTGGTGACAGGGGCAAGTTGGCCCGAGCCTCCGGGAACTACG
CGACTGTCATCTCCCACAACCCGGAGACCAAGAAGACCCGAGTGAAGCTGCCGTCCGGTTCAAAGAAGGTCATTTCTTCC
GCCAACAGAGCCGTGGTGGGTGTGGTCGCTGGAGGTGGCCGCATTGACAAGCCCATTCTGAAGGCTGGCCGTGCTTACCA
CAAGTACAAGGCAAAGAGGAATTGCTGGCCACGTGTGCGGGGTGTGGCCATGAATCCTGTGGAGCATCCTTTTGGAGGTG
GCAACCACCAACACATCGGCAAACCCTCTACTATCCGCAGAGATGCCCCTGCTGGCCGCAAAGTGGGTCTTATTGCTGCT
CGCCGGACTGGGCGTCTGCGGGGAACCAAGACTGTGCAGGAGAAGGAGAACTAG

Library Parental gene expression (RPM)
SRP017611_brain 129 .33 RPM
SRP017611_kidney 1246 .52 RPM
SRP017611_liver 375 .18 RPM
SRP012049_cerebellum 350 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000017933 ortholog_one2many 1 retrogene
retro_acar_31,
Bos taurus ENSBTAG00000026327 possible_ortholog 1 retrogene
retro_btau_96,
Callithrix jacchus ENSCJAG00000021388 ortholog_one2one 4 retrogenes
retro_cjac_1109, retro_cjac_1169, retro_cjac_1579, retro_cjac_2047,
Cavia porcellus ENSCPOG00000003854 ortholog_one2one 2 retrogenes
retro_cpor_1006, retro_cpor_1415,
Dasypus novemcinctus ENSDNOG00000009300 ortholog_one2one 2 retrogenes
retro_dnov_2505, retro_dnov_503,
Macaca mulatta ENSMMUG00000013379 possible_ortholog 2 retrogenes
retro_mmul_1470, retro_mmul_1531,
Mustela putorius furo ENSMPUG00000006022 possible_ortholog 1 retrogene
retro_mputfur_1517,
Nomascus leucogenys ENSNLEG00000010952 ortholog_one2one 2 retrogenes
retro_nleu_1603, retro_nleu_594,
Oryctolagus cuniculus ENSOCUG00000024716 possible_ortholog 1 retrogene
retro_ocun_146,
Rattus norvegicus ENSRNOG00000048523 possible_ortholog 2 retrogenes
retro_rnor_122, retro_rnor_239,
Tupaia belangeri ENSTBEG00000010363 ortholog_one2one 2 retrogenes
retro_tbel_2826, retro_tbel_3453,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1132 82.21 61.87
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Download FASTA sequences of all ENSCAFG00000001677 retrocopies