Parental gene: | Rpl8, ENSMUSG00000003970 |
| Aliases: | None |
| Description: | ribosomal protein L8 [Source:MGI Symbol;Acc:MGI:1350927] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 15:76904070..76906318(+) |
>ENSMUSG00000003970
ATGGGCCGTGTGATCCGAGGGCAGAGGAAAGGCGCGGGTTCTGTTTTCCGTGCGCACGTGAAGCACCGTAAGGGCGCCGC
GCGCCTACGTGCTGTGGACTTCGCGGAGCGACACGGCTACATTAAAGGCATCGTAAAGGACATCATTCATGACCCTGGCC
GCGGCGCTCCCCTCGCCAAAGTCGTCTTTCGGGATCCCTACCGATTCAAGAAGCGGACAGAGCTGTTCATCGCAGCGGAG
GGGATCCACACTGGACAGTTCGTGTACTGCGGCAAGAAGGCCCAGCTGAATATCGGCAATGTTTTGCCCGTGGGCACCAT
GCCTGAGGGTACGATCGTGTGTTGTCTGGAGGAGAAACCTGGGGACAGGGGCAAGCTGGCCCGAGCCTCCGGGAACTACG
CCACAGTCATCTCCCACAACCCAGAGACCAAGAAGACTCGAGTGAAGCTGCCTTCGGGGTCCAAGAAGGTCATTTCCTCT
GCCAACAGAGCCGTTGTTGGTGTTGTGGCTGGTGGGGGCAGAATTGACAAGCCTATCTTAAAGGCTGGCCGTGCCTACCA
CAAGTACAAGGCAAAGAGGAACTGCTGGCCACGTGTGCGGGGTGTGGCCATGAATCCTGTGGAGCATCCCTTTGGAGGTG
GTAACCACCAGCACATTGGCAAACCCTCCACCATCCGAAGAGATGCCCCTGCTGGGCGCAAAGTGGGTCTCATTGCTGCC
CGCCGGACTGGACGGCTGCGTGGAACCAAAACTGTACAGGAGAAGGAGAACTAG
ATGGGCCGTGTGATCCGAGGGCAGAGGAAAGGCGCGGGTTCTGTTTTCCGTGCGCACGTGAAGCACCGTAAGGGCGCCGC
GCGCCTACGTGCTGTGGACTTCGCGGAGCGACACGGCTACATTAAAGGCATCGTAAAGGACATCATTCATGACCCTGGCC
GCGGCGCTCCCCTCGCCAAAGTCGTCTTTCGGGATCCCTACCGATTCAAGAAGCGGACAGAGCTGTTCATCGCAGCGGAG
GGGATCCACACTGGACAGTTCGTGTACTGCGGCAAGAAGGCCCAGCTGAATATCGGCAATGTTTTGCCCGTGGGCACCAT
GCCTGAGGGTACGATCGTGTGTTGTCTGGAGGAGAAACCTGGGGACAGGGGCAAGCTGGCCCGAGCCTCCGGGAACTACG
CCACAGTCATCTCCCACAACCCAGAGACCAAGAAGACTCGAGTGAAGCTGCCTTCGGGGTCCAAGAAGGTCATTTCCTCT
GCCAACAGAGCCGTTGTTGGTGTTGTGGCTGGTGGGGGCAGAATTGACAAGCCTATCTTAAAGGCTGGCCGTGCCTACCA
CAAGTACAAGGCAAAGAGGAACTGCTGGCCACGTGTGCGGGGTGTGGCCATGAATCCTGTGGAGCATCCCTTTGGAGGTG
GTAACCACCAGCACATTGGCAAACCCTCCACCATCCGAAGAGATGCCCCTGCTGGGCGCAAAGTGGGTCTCATTGCTGCC
CGCCGGACTGGACGGCTGCGTGGAACCAAAACTGTACAGGAGAAGGAGAACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 123 .99 RPM |
| SRP007412_cerebellum | 178 .07 RPM |
| SRP007412_heart | 251 .66 RPM |
| SRP007412_kidney | 251 .61 RPM |
| SRP007412_liver | 224 .72 RPM |
| SRP007412_testis | 201 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000017933 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000026327 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000009300 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008164 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000013379 | possible_ortholog | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000006022 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000024716 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000020716 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000048523 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2004 | 58.56 | 68.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2112 | 60.54 | 84.82 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000003970 retrocopies