Parental gene:

DDI2, ENSSSCG00000003462

Aliases:None
Description:DNA-damage inducible 1 homolog 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:24578]
Organism:Pig (Sus scrofa)
Coordinates:6:69143283..69174388(-)


>ENSSSCG00000003462
ATGCTGCTCACCGTGTACTGTGTGCGGAGGGACCTCTCCGAGGTGACCTTTTCCCTCCAGGTCGACGCCGACTTCGAGCT
GCACAACTTCCGCGCGCTGTGTGAGCTCGAGTCTGGCATCCCCGCAGCCGAGAGTCAGATTGTCTACGCTGAAAGACCTC
TCACAGACAACCACAGATCCCTGGCTTCCTATGGCTTAAAAGATGGTGACGTTGTGATTTTACGACAGAAGGAAAATGCC
GACCCTCGACCTTCGGTGCAGTTCCCAAACTTACCCCGAATAGACTTTCGTAGTATAGCTGTGCCTGGCACGTCAAACTC
CCGGCAGCGCCAGGCGCAAGGAGTACAGCAGTCCCACTCATCTCCTGGAGAAATAGCTTCATCTCCTCAGGGCTTGGACA
ATCCAGCCTTGCTCCGAGACATGTTGCTGGCCAACCCGCATGAGCTGTCCCTGCTGAAGGAGCGCAATCCACCCCTGGCA
GATGCTCTGCTCAGTGGAGATCTTGAGAAATTTTCTAGGGTCCTGGTGGAGCAGCAGCAGGACCGAGCCCGGAGGGAACA
GGAAAGGATTCGTCTCTTTTCTGCAGACCCTTTTGATCTTGAAGCTCAGGCAAAGATAGAAGAAGATATAAGGCAACAGA
ACATTGAGGAAAACATGACAATAGCTATGGAAGAGGCTCCAGAAAGTTTTGGCCAAGTAGTGATGCTTTATATTAACTGC
AAAGTGAATGGACATCCTGTGAAAGCCTTTGTTGACTCAGGTGCCCAGATGACTATTATGAGTCAAGCCTGTGCAGAGAG
GTGTAACATAATGAGGCTGGTGGATCGTCGGTGGGCAGGGATCGCCAAAGGAGTGGGCACCCAGAAGATCATTGGAAGGG
TTCATCTAGCTCAGGTTCAGATTGAAGGAGATTTCCTGGCGTGTTCCTTCTCAATACTTGAGGAACAGCCCATGGACATG
CTTCTGGGACTGGACATGCTGAAGCGGCATCAGTGTTCTATTGACCTCAAGAAAAATGTACTGGTGATCGGCACCACAGG
CTCACAGACGACCTTCCTTCCCGAGGGAGAGTTACCAGAGTGTGCCCGGTTGGCGTATGGGGCTGGGCGAGAGGAAGTAC
GGCCAGAGGAGATTGCAGACCAAGAATTAGCAGAAGCCCTTCAAAAATCCGTAGAAGATGCAGGTATTTGGAGTGGC

Library Parental gene expression (RPM)
SRP014902_placenta 6 .24 RPM
SRP014902_testis 8 .35 RPM
SRP018288_heart 5 .53 RPM
SRP018288_kidney 20 .19 RPM
SRP018288_liver 27 .18 RPM
SRP018288_lung 14 .36 RPM
SRP018856_adipose 14 .64 RPM
SRP035408_brain 1 .27 RPM
SRP035408_liver 5 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011873 ortholog_one2one 1 retrogene
retro_amel_10,
Bos taurus ENSBTAG00000018718 ortholog_one2one 2 retrogenes
retro_btau_15, retro_btau_650,
Canis familiaris ENSCAFG00000016220 ortholog_one2one 1 retrogene
retro_cfam_193,
Callithrix jacchus ENSCJAG00000008625 ortholog_one2one 1 retrogene
retro_cjac_196,
Cavia porcellus ENSCPOG00000020885 ortholog_one2one 1 retrogene
retro_cpor_88,
Equus caballus ENSECAG00000000762 ortholog_one2one 1 retrogene
retro_ecab_110,
Homo sapiens ENSG00000197312 ortholog_one2one 1 retrogene
retro_hsap_96,
Gorilla gorilla ENSGGOG00000013537 ortholog_one2one 1 retrogene
retro_ggor_143,
Macropus eugenii ENSMEUG00000006148 ortholog_one2one 1 retrogene
retro_meug_1364,
Myotis lucifugus ENSMLUG00000030669 ortholog_one2one 1 retrogene
retro_mluc_68,
Macaca mulatta ENSMMUG00000019912 ortholog_one2one 1 retrogene
retro_mmul_231,
Monodelphis domestica ENSMODG00000003515 ortholog_one2one 1 retrogene
retro_mdom_282,
Mustela putorius furo ENSMPUG00000016332 ortholog_one2one 1 retrogene
retro_mputfur_1509,
Mus musculus ENSMUSG00000078515 ortholog_one2one 1 retrogene
retro_mmus_67,
Oryctolagus cuniculus ENSOCUG00000023891 ortholog_one2one 1 retrogene
retro_ocun_249,
Otolemur garnettii ENSOGAG00000027709 ortholog_one2one 1 retrogene
retro_ogar_4,
Ochotona princeps ENSOPRG00000018448 ortholog_one2one 1 retrogene
retro_opri_4,
Pongo abelii ENSPPYG00000001841 ortholog_one2one 1 retrogene
retro_pabe_158,
Pan troglodytes ENSPTRG00000024059 ortholog_one2one 1 retrogene
retro_ptro_570,
Pteropus vampyrus ENSPVAG00000005084 ortholog_one2one 1 retrogene
retro_pvam_420,
Rattus norvegicus ENSRNOG00000012274 ortholog_one2one 1 retrogene
retro_rnor_2606,
Ictidomys tridecemlineatus ENSSTOG00000019447 ortholog_one2one 1 retrogene
retro_itri_93,
Tarsius syrichta ENSTSYG00000002522 ortholog_one2one 1 retrogene
retro_tsyr_1120,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_6 76.74 95.24
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Download FASTA sequences of all ENSSSCG00000003462 retrocopies