Parental gene:

EIF4A1, ENSSARG00000006017

Aliases:None
Description:eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:3282]
Organism:Shrew (Sorex araneus)
Coordinates:GeneScaffold_1637:236978..242377(+)


>ENSSARG00000006017
ATGTCTGCGAGTCAGGATTCCCGATCCAGAGACAATGGCCCCGATGGGATGGAGCCCGAAGGTGTCATCGAGAGTAATTG
GAACGAAATTGTTGACAGCTTTGATGACATGAACCTCTCTGAATCCCTCCTCCGTGGCATCTACGCCTACGGTTTTGAGA
AACCCTCTGCCATCCAGCAGCGAGCCATTCTTCCTTGTATCAAGGGTTATGATGTGATCGCTCAAGCCCAATCTGGGACT
GGGAAAACGGCCACTTTTGCCATATCAATTCTGCAGCAAATTGAACTGGATTTAAAAGCCACCCAGGCCTTGGTGCTGGC
ACCAACTAGAGAGTTGGCGCAGCAGATACAAAAGGTGGTCATGGCATTAGGAGATTACATGGGTGCCTCCTGCCACGCCT
GCATTGGGGGTACCAACGTGCGTGCTGAGGTGCAGAAGCTGCAGATGGAAGCGCCCCACATCATTGTGGGTACCCCAGGC
CGTGTGTTTGACATGCTTAACCGGAGATACCTGTCTCCCAAATACATCAAGATGTTTGTGCTGGATGAAGCTGATGAAAT
GTTGAGTCGAGGATTCAAGGATCAGATTTATGATATATTTCAAAAGCTTAATAGCAACACCCAGGTGGTTTTGCTGTCTG
CTACAATGCCTTCTGATGTCCTTGAGGTGACCAAGAAGTTCATGAGGGACCCTATTCGAATTCTGGTCAAGAAAGAAGAG
TTGACTTTGGAGGGTATTCGCCAGTTCTACATCAATGTGGAGCGAGAGGAGTGGAAGCTGGACACACTGTGTGACTTATA
TGAAACCTTGACCATCACCCAAGCAGTCATTTTCATCAACACCCGAAGGAAGGTTGATTGGCTCACCGAGAAGATGCATG
CCCGAGATTTCACCGTGTCTGCCATGCATGGAGATATGGACCAAAAGGAACGAGATGTAATCATGAGGGAATTCCGCTCT
GGTTCCAGTAGAGTATTGATTACCACTGACCTGCTGGCCAGAGGCATCGATGTACAACAGGTTTCTTTAGTCATCAACTA
TGACCTTCCCACTAACAGGGAAAACTATATTCACAGAATTGGTCGTGGTGGACGTTTTGGGCGTAAGGGTGTGGCTATCA
ACATGGTGACAGAAGAAGACAAGAGAACTCTTCGAGATATCGAGACCTTCTACAATACCTCCATTGAGGAGATGCCTCTC
AATGTTGCCGACCTCATCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016753 possible_ortholog 1 retrogene
retro_amel_1300,
Callithrix jacchus ENSCJAG00000015114 possible_ortholog 8 retrogenes
retro_cjac_1876, retro_cjac_2046, retro_cjac_2521, retro_cjac_2679, retro_cjac_3086, retro_cjac_3203, retro_cjac_395, retro_cjac_727,
Cavia porcellus ENSCPOG00000004900 ortholog_one2one 1 retrogene
retro_cpor_1088,
Dipodomys ordii ENSDORG00000014225 possible_ortholog 1 retrogene
retro_dord_732,
Erinaceus europaeus ENSEEUG00000003581 ortholog_one2one 1 retrogene
retro_eeur_610,
Felis catus ENSFCAG00000024897 ortholog_one2one 1 retrogene
retro_fcat_370,
Homo sapiens ENSG00000161960 ortholog_one2one 10 retrogenes
retro_hsap_1004, retro_hsap_1182, retro_hsap_1252, retro_hsap_1270, retro_hsap_1796, retro_hsap_2520, retro_hsap_4836, retro_hsap_4873, retro_hsap_4931, retro_hsap_610,
Gorilla gorilla ENSGGOG00000024702 ortholog_one2one 8 retrogenes
retro_ggor_1321, retro_ggor_1572, retro_ggor_3015, retro_ggor_537, retro_ggor_798, retro_ggor_920, retro_ggor_983, retro_ggor_998,
Macropus eugenii ENSMEUG00000010780 ortholog_one2many 2 retrogenes
retro_meug_158, retro_meug_179,
Microcebus murinus ENSMICG00000014759 possible_ortholog 2 retrogenes
retro_mmur_1164, retro_mmur_1477,
Myotis lucifugus ENSMLUG00000003415 ortholog_one2one 3 retrogenes
retro_mluc_1047, retro_mluc_1229, retro_mluc_1805,
Macaca mulatta ENSMMUG00000013499 ortholog_one2one 1 retrogene
retro_mmul_1280,
Monodelphis domestica ENSMODG00000007090 ortholog_one2many 3 retrogenes
retro_mdom_1282, retro_mdom_326, retro_mdom_711,
Mus musculus ENSMUSG00000059796 ortholog_one2one 7 retrogenes
retro_mmus_1810, retro_mmus_1853, retro_mmus_2320, retro_mmus_2473, retro_mmus_3122, retro_mmus_325, retro_mmus_527,
Nomascus leucogenys ENSNLEG00000009547 ortholog_one2one 7 retrogenes
retro_nleu_2109, retro_nleu_2117, retro_nleu_230, retro_nleu_2470, retro_nleu_2769, retro_nleu_440, retro_nleu_701,
Otolemur garnettii ENSOGAG00000008132 possible_ortholog 2 retrogenes
retro_ogar_1375, retro_ogar_1862,
Ochotona princeps ENSOPRG00000008591 possible_ortholog 2 retrogenes
retro_opri_155, retro_opri_985,
Pan troglodytes ENSPTRG00000008694 ortholog_one2one 10 retrogenes
retro_ptro_1201, retro_ptro_1465, retro_ptro_2954, retro_ptro_3112, retro_ptro_3247, retro_ptro_450, retro_ptro_750, retro_ptro_810, retro_ptro_862, retro_ptro_870,
Rattus norvegicus ENSRNOG00000030628 ortholog_one2one 3 retrogenes
retro_rnor_1059, retro_rnor_2213, retro_rnor_2306,
Ictidomys tridecemlineatus ENSSTOG00000024814 ortholog_one2one 1 retrogene
retro_itri_610,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_6 99.07 52.96
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2. retro_sara_89 68.25 93.10
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3. retro_sara_224 80.89 55.17
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4. retro_sara_383 93.08 63.79
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5. retro_sara_461 73.39 53.20
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6. retro_sara_567 86.03 100.00
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7. retro_sara_605 55.64 93.10
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Download FASTA sequences of all ENSSARG00000006017 retrocopies