Parental gene:

Wbp11, ENSRNOG00000005505

Aliases:None
Description:WW domain-binding protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q5PQQ2]
Organism:Rat (Rattus norvegicus)
Coordinates:4:234414448..234427819(-)


>ENSRNOG00000005505
ATGGGACGAAGATCAACATCCTCCACCAAGAGTGGGAAGTTTATGAACCCCACAGACCAAGCCCGAAAAGAAGCCCGGAA
AAGAGAGTTGAAAAAGAACAAAAAACAGCGCATGATGGTCCGAGCTGCAGTTTTGAAGATGAAAGACCCCAAGCAGATTA
TCCGGGACATGGAGAAATTGGATGAAATGGAGTTTAACCCAGTGCAACAGCCGCAGTTGAATGAAAAAGTACTGAAAGAC
AAGCGTAAAAAGCTGCGAGAAACCTTTGAACGAATTCTGCGGCTCTATGAGAAAGAAAACCCAGACATCTACAAAGAGCT
GAGGAAGCTGGAAGTGGAGTACGAGCAGAAGAGGGCGCAGCTGAGCCAGTACTTTGATGCCGTCAAGAACGCCCAGCATG
TGGAAGTAGAGAGCATCCCTCTGCCAGATATGCCGCATGCCCCTTCCAACATCCTGATCCAGGACATTCCTCTTCCTGGT
GCCCAGCCACCCTCTATCCTGAAGAAAACCTCGGCATATGGGCCTCCAACTCGAGCAGTTTCTATCCTTCCTCTCCTGGG
ACACGGTGTTCCACGTTTGCCCCCTGGCAGAAAACCGCCTGGCCCTCCACCTGGCCCACCTCCTCCTCAAGTTCTGCAGA
TGTATGGCCGTAAAGTGGGCTTTGCTCTCGATCTTCCCCCTCGGAGGCGAGATGAAGACATGCTGTACAGTCCGGAACTT
GCTCAGCGGGGCCATGATGATGACATGTCCAGCACCAGTGAGGACGACGGCTATCCTGAGGACATGGATCAGGATAAGCA
CGATGACAGTACTGAGGACAGTGACACTGACAGATCCGATGCAGAAAGTGATGGGGATGAGTTCGGCCACCGTGACGACA
GTGAGCGTGACAACACTGAGGAGAAGAAGTCAGGTCTGAGCGTCCGGTTTGCAGATATGCCTGGGAAATCTAGGAAGAAG
AAGAAGAACATGAAGGAGCTGACTCCTCTTCAAGCCATGATGCTGCGAATGGCAGGTCAGGAAATCCCTGAGGAAGGACG
GGAAGTGGAGGAGTTTTCAGAGGAGGAGGACGACGACGACTCTGAGGACTCTGAGGCAGAGAAGCCATCGCAGAAGCAGC
ATAAAGAGGATTCCCACGCTGACGGCTCCTCGGCCGCCTCTTCACAGCAGCAGGCCCCTCCACAGGCCGTTCCTCCTTCT
CAGATACAAGCACCTCCCATGCCAGGACCGCCACCTCTCGGACCACCGCCTGCCCCACCCTTACGGCCTCCTGGACCACC
TACAGGCCTTCCTCCTGGGCCACCTCCAGGGGCTCCTCCATTCCTGAGACCACCTGGGATGCCAGGAATCCGAGGGCCTT
TACCACGGCTTTTACCTCCAGGACCACCACCAGGCCGACCTCCTGGCCCTCCGCCAGGCCCACCTCCAGGTCTCCCCCCT
GGGCCCCCTCCTCGAGGACCCCCACCAAGGCTACCTCCTCCTGCACCTCCAGGTATCCCTCCTCCTCGTCCTGGCATGAT
GCGCCCTCCGTTGGTGCCTCCTCTTGGACCTGCCCCGCCTGGCCTTTTCCCGCCAGCTCCCTTACCCAACCCAGGGGTGT
TGAGTGCCCCACCCAGCCTCATTCAGCGACCGAAGGCGGATGATGCAAGTGCAGCCACCATCGAGAAGAAGGCCACAGCG
ACCATCAGTGCCAAGCCCCAGATCACCAATCCCAAGGCAGAGGTCACACGGTTTGTGCCCACTGCACTGAGGGTGCGCCG
CGAGAATAAGGGGGCTACTGCCGTTCCCCAAAGAAGGTCAGAGGAGGACTCTGCTGTGCCTGTGGCCAAAGCAGCCCCCA
GATCTGGGCCTTCAGTTCCTGTGTCGGTACAGACTAAGGACGATGTCTATGAAGCGTTTATGAAAGAGATGGAAGGGCTG
CTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 0 .00 RPM
SRP017611_kidney 0 .07 RPM
SRP017611_liver 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014759 ortholog_many2many 1 retrogene
retro_btau_20,
Canis familiaris ENSCAFG00000012926 ortholog_one2many 2 retrogenes
retro_cfam_1369, retro_cfam_1911,
Callithrix jacchus ENSCJAG00000021611 ortholog_many2many 1 retrogene
retro_cjac_1737,
Homo sapiens ENSG00000084463 ortholog_one2many 2 retrogenes
retro_hsap_1878, retro_hsap_4719,
Gorilla gorilla ENSGGOG00000004448 ortholog_one2many 3 retrogenes
retro_ggor_1375, retro_ggor_1711, retro_ggor_2932,
Macropus eugenii ENSMEUG00000013971 ortholog_one2many 1 retrogene
retro_meug_1952,
Myotis lucifugus ENSMLUG00000015216 ortholog_many2many 1 retrogene
retro_mluc_1074,
Macaca mulatta ENSMMUG00000019299 ortholog_many2many 1 retrogene
retro_mmul_1329,
Monodelphis domestica ENSMODG00000017949 ortholog_many2many 1 retrogene
retro_mdom_143,
Mustela putorius furo ENSMPUG00000011619 ortholog_one2many 1 retrogene
retro_mputfur_280,
Mus musculus ENSMUSG00000030216 ortholog_one2many 1 retrogene
retro_mmus_2740,
Nomascus leucogenys ENSNLEG00000003926 ortholog_one2many 1 retrogene
retro_nleu_2651,
Oryctolagus cuniculus ENSOCUG00000017177 ortholog_one2many 1 retrogene
retro_ocun_974,
Otolemur garnettii ENSOGAG00000010518 ortholog_many2many 1 retrogene
retro_ogar_207,
Ochotona princeps ENSOPRG00000015008 ortholog_one2many 3 retrogenes
retro_opri_107, retro_opri_1159, retro_opri_678,
Pongo abelii ENSPPYG00000004323 ortholog_one2many 3 retrogenes
retro_pabe_1558, retro_pabe_2099, retro_pabe_3663,
Pan troglodytes ENSPTRG00000004724 ortholog_one2many 3 retrogenes
retro_ptro_1260, retro_ptro_1637, retro_ptro_3136,
Rattus norvegicus ENSRNOG00000049593 within_species_paralog 1 retrogene
retro_rnor_740,
Sorex araneus ENSSARG00000007085 ortholog_one2many 1 retrogene
retro_sara_753,
Sarcophilus harrisii ENSSHAG00000016649 ortholog_many2many 1 retrogene
retro_shar_81,
Tupaia belangeri ENSTBEG00000003394 ortholog_one2many 1 retrogene
retro_tbel_2213,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_741 70.25 55.69
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2. retro_rnor_1287 71.75 87.36
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3. retro_rnor_2726 62.64 81.28
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Download FASTA sequences of all ENSRNOG00000005505 retrocopies